Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0961 ATGAGTTCTTCAGCAGTGGATACCACCTGCAAATTTGAGGATATGCAGGTGGACATTGAGAAGAATCAGCAGGATGTAAGGTCTCAGTGGGTGCTTAATGCACCTGAGCCCCCAAGTCCTTGGCATGTGGCTGTAGGTTGTTTCAAGAAAACAGTCTCCAATTATAGAGAAAAATTTTACTCTCTAAGTGATCAATCATGTGGCACAGTCCTACTTTCAGTTTTACAGGTCATTTTTCCTATTCTTGTTTGGGGCAGAAGCTACACTGCTGCTAAATTTAGGAAAGATTTTCTTGCTGGCCTCACTATTGCTAGTCTTTGTATTCCCCAGAGCATAGGATATGCAACATTGGCAAACCTTGCTCCTCAATATGGACTTTATACGAGTGTTGTACCACCGCTTATCTACGCTGTAATGGGAACTTCAAGAGAGATTGCAATTGGTCCTGTGGCAGTGGTTTCCTTGCTGTTATCCTCAATGGTTCAAAAATTAGTAGACCCTTCTACTGATCCAATTGGTTATACAAAGCTCATTTTTCTTGCCACTCTCTTTGCTGGTATCTTTCAAACAGCCTTTGGACTATTCAGGCTAGGGTTTCTTGTGGATTTCCTATCGCATGCTGCAATTGTTGGATTTGTAGCTGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACACATTTTACAACCAAAACAGACATAATCTCTGTCATGAAAGCTGTTTGGGAAGCATTTCATAACCCCTGGAACCCTCATAATTTTATCCTGGGAGGCTCATTCTTGGTGTTCATCCTAACTACTAGATTTCTGGGTAAAAGGAAGAAGAATCTGTTCTGGTTGGCATCAATATCACCACTTGTATCAGTTATACTATCAACTCTAGTTGTTTTTCTAACACGAGCTGATAAACATGGAGTTAAAATTGTGAAACATGTCAAAGGGGGACTCAATCCAAGCTCCATCAATCAACTAGACTTTAACAGTCCCCATGTTGTAGATGTTGCCAAAATTGGACTAATTGTTGCTGTTGTTGCCCTTACTGAATCTGTTGCTGTTGGGCGATCTTTTGCATCGATTAAAGGATACCAACTTGATGGAAACAAAGAGATGATGTCAATAGGCTTCACAAACATCATAGGATCTCTCACCTCCTGCTATGTTGCAACTGGTTCGTTCTCTCGCACGGCTGTTAATTATGCTGCTGGATGTGAAAGTTTAATATCAAACATTGTGATGGCCATTACAGTGATGATATCACTGCAGTTTTTGACAAATCTATTGTATTATACACCAATTGCTATTATTGCATCAGTGATTCTCTCTGCTCTACCTGGACTCATAGACATAACTGAAGCTTACAAAATTTGGAAGGTTGATAAGCTTGACTTTCTTGCTTGTGTTGGTGCCTTCTTTGGTGTACTCTTTGCTTCTGTGGAGATTGGTCTTCTAGCAGCGGTGGTAATATCATTTACAAAGATAATTCTGATATCAATTAGACCAAGCACAGAAACTTTAGGAAAACTTCCTGGAACTGATATGTTCTGTGATGTTGATCAGTATCCTATGGCAATTCAGATTCCAGGGGTTATGATAATACGTATGAAATCTGCATTGCTTTGCTTTGCAAATGCCAATTTCGTTAAAGACAGGATCATCAAATGGGTCACTCAGAAAGGATTGGAAGATGACAAGGGAAATTTAAAAAGCACCATTCAACTTGTAATTCTTGACACCTCGAATTTGGTGAACATTGACACCTCCGGAATTGCTTCTATGGAGGAACTGTACAAGTGTTTGTCTTCACATGGGAAACAGTTGGCCATCACGAATCCGAGGTGGCAAGTAATTCACAAGCTAAAGGTGTCGAACTTTGTCAACAAAATAGGTGGCAGAGTCTATCTCACTGTTGAAGAAGCTGTTGCCAGCTGCAAGAGTAATCAGTTCTAA 1965 0.4041 MSSSAVDTTCKFEDMQVDIEKNQQDVRSQWVLNAPEPPSPWHVAVGCFKKTVSNYREKFYSLSDQSCGTVLLSVLQVIFPILVWGRSYTAAKFRKDFLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLVDPSTDPIGYTKLIFLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVMKAVWEAFHNPWNPHNFILGGSFLVFILTTRFLGKRKKNLFWLASISPLVSVILSTLVVFLTRADKHGVKIVKHVKGGLNPSSINQLDFNSPHVVDVAKIGLIVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAITVMISLQFLTNLLYYTPIAIIASVILSALPGLIDITEAYKIWKVDKLDFLACVGAFFGVLFASVEIGLLAAVVISFTKIILISIRPSTETLGKLPGTDMFCDVDQYPMAIQIPGVMIIRMKSALLCFANANFVKDRIIKWVTQKGLEDDKGNLKSTIQLVILDTSNLVNIDTSGIASMEELYKCLSSHGKQLAITNPRWQVIHKLKVSNFVNKIGGRVYLTVEEAVASCKSNQF* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0961 654 Pfam STAS domain 526 645 IPR002645 -
Mal1g0961 654 ProSiteProfiles STAS domain profile. 545 649 IPR002645 -
Mal1g0961 654 TIGRFAM sulP: sulfate permease 80 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mal1g0961 654 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Mal1g0961 654 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 17 652 - -
Mal1g0961 654 CDD STAS_SulP_like_sulfate_transporter 526 635 - -
Mal1g0961 654 Pfam Sulfate permease family 93 473 IPR011547 GO:0016021
Mal1g0961 654 PANTHER SULFATE TRANSPORTER 17 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mal1g0961 654 SUPERFAMILY SpoIIaa-like 530 649 IPR036513 -
Mal1g0961 654 Gene3D STAS domain 505 653 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0961 Mal-Chr1 11493492 11500771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0961 21 649 Inorganic Solute Cotransporters AT5G10180 66.984 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0961 K17469 - gmx:100781327 1063.52