Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0960 ATGAATCTAGTGGCACCATCTCCTCCATCACTAGAAGTGTTAATGGACCTTGATAATGAGAACAATGGTAGAGAAAACAGGATACTATGGGTGCTGAATCCTCCGGAGCCACCGTGCATGCTGCGCCGGTTCTTTGAAAATATCAAGAACATATTACATTCTCCAATTCGAAATAGATTCTTTTATGTCCAACATCAGCCTTCGCAAAAAATAGTATTCTCCTTGTTGCAGGGCGTTTTTCCAATCCTTATTTCATTCAAAAACTACAATGTTCAAAAGTTTAAGTGCGACGTCTTGGCGGGTCTAGTCCTTGCAATCTTTGCTATTCCACAGGCAATGGGAAATGCGAGTTTGGCGAAGATGAGTCCAGAATATGGCCTCTATACAAGTATTCTCCCACCTCTTATTTATGCTTTGCTAGCAACTTCAAGGGAGATGGTAATAGGACCTTCAACTGTGGATTCATTGCTACTTTCCTCAATGATTCAAACATTGAAAGATCCTATAAATGATTCCATAGCTTACACTCAACTTGTTTTGACTGCAACTTTTTTTACTGGTGTTTTCCAAGTTGCTTTCGGATTCTTCAGGTTAGGGTTTCTATTGGATTATCTTTCACATGCCACAATCGTGGGATTCATGGCAGCAGTTGCCATAGGCATTGTACTACAACAATTGAAAGATTTATTTGGAATCGCCAACTTTTCCATCAAGGCTGATTTAATTTCAGTGATTAATTCTCTTTGGTCATCTTACAAAAACCATTCAGAGTGGCATCCTTACAATTTTATAATTGGATTCTCATTTTTGTCTTTTATCATATTTACCAGATTCCTGGGGAGAAGGAAAAAGAAACTCTTGTGGTTGTCACACATTGCTCCTCTTCTTTCATTCATTATATCCACTGCTATTGCATATAAAGTAAATGTTCATCAACTCAAACTTGAGGACTATAAAATTGAAGTGTTAGGACCAATTAAAGGAGGTAGCTTGAATCCAAGCTCACTCAATCAATTACAATTTGATGGTAATGGTAAATATTTGGGTCCTTTGATCAAAATAGCATTGACTGTTGCTATTATTTCAACCACGCAATCTGTAGCTGTTGGCAGAATATATGCATCACTAAGAGGTTACAATATTGATCCAAACAGAGAAGTTCTATCCTTAGGCATAATGAACATTTTTGGATCCTTCACTTCTTGTTATGTTGCATCAGGTTCAATTGCACGTACTGCTGTAAATTATAATGCTGGCTCTCAAACAATGTTGTCAAGCGTAGTGATGGCACTCACTGTGTTGATGTCGCTAAAGTTTTTGACAAAACTCTTATATTTCACTCCCAAAGCAATGCTAGCAGCAATAATTCTTTCAGCTGTACCAGGACTTATTGATTTTAAAAAAGCATATGGAATTTGGAAGGTTGATAAATTAGATTTCCTTGCTTGTGCTGGAGCCTTCTTTGGAGTGTTGTTTTCTTCTGTGGAAATGGGCCTTGCAATTGGGGTCACAGTATCATTTGCTAAGATAATTTTGATATCAATTCAACCTGGCATAGCGGTTGTTGGAAGGCTTCCAGGAACTGATGCATTTGGTGACGTGGAACAATATCCAATGGCAATTAGCATGCCTGGAATTTTGGTTGTCTCTATAAAATCTGCTTGGCTTTGTTTTGCAAATGCAAGTCCTATAAGGGAAAGGATCGAGAGATGGGCGATTGATGAAGAAGGTGAAAATAGTAAAGGAGAAAGCATTATCAAAGTTGTCATCATTGATACATCAAGTCTTGTGAGTATTGACACATCAGGAATAGCTTCTCTGGTGGAGCTGAATAAAAATCTTGCTTTACATGGAGTGACGTTATCTATTGCTAACCCAAGGTGGCAAGTGATTCACAAACTAAGATTGGCAAACTTTGTTAGTGAAATTGGAGGAAGGGTTTTTCTTTCTGTGGGAGAAGCTATAGACGCAATATTTAGTGCTAAAATGGCTACAGTGTAA 2001 0.3798 MNLVAPSPPSLEVLMDLDNENNGRENRILWVLNPPEPPCMLRRFFENIKNILHSPIRNRFFYVQHQPSQKIVFSLLQGVFPILISFKNYNVQKFKCDVLAGLVLAIFAIPQAMGNASLAKMSPEYGLYTSILPPLIYALLATSREMVIGPSTVDSLLLSSMIQTLKDPINDSIAYTQLVLTATFFTGVFQVAFGFFRLGFLLDYLSHATIVGFMAAVAIGIVLQQLKDLFGIANFSIKADLISVINSLWSSYKNHSEWHPYNFIIGFSFLSFIIFTRFLGRRKKKLLWLSHIAPLLSFIISTAIAYKVNVHQLKLEDYKIEVLGPIKGGSLNPSSLNQLQFDGNGKYLGPLIKIALTVAIISTTQSVAVGRIYASLRGYNIDPNREVLSLGIMNIFGSFTSCYVASGSIARTAVNYNAGSQTMLSSVVMALTVLMSLKFLTKLLYFTPKAMLAAIILSAVPGLIDFKKAYGIWKVDKLDFLACAGAFFGVLFSSVEMGLAIGVTVSFAKIILISIQPGIAVVGRLPGTDAFGDVEQYPMAISMPGILVVSIKSAWLCFANASPIRERIERWAIDEEGENSKGESIIKVVIIDTSSLVSIDTSGIASLVELNKNLALHGVTLSIANPRWQVIHKLRLANFVSEIGGRVFLSVGEAIDAIFSAKMATV* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0960 666 SUPERFAMILY SpoIIaa-like 542 658 IPR036513 -
Mal1g0960 666 TIGRFAM sulP: sulfate permease 81 650 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mal1g0960 666 Gene3D STAS domain 516 660 IPR036513 -
Mal1g0960 666 PANTHER SULFATE TRANSPORTER 16 665 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mal1g0960 666 Pfam Sulfate permease family 94 484 IPR011547 GO:0016021
Mal1g0960 666 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Mal1g0960 666 ProSiteProfiles STAS domain profile. 556 658 IPR002645 -
Mal1g0960 666 CDD STAS_SulP_like_sulfate_transporter 537 649 - -
Mal1g0960 666 Pfam STAS domain 537 654 IPR002645 -
Mal1g0960 666 PANTHER EARLY NODULIN-70 16 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0960 Mal-Chr1 11482750 11488406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0960 24 663 Inorganic Solute Cotransporters AT5G10180 52.255 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0960 K17469 - gmx:100817841 889.797