Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0925 ATGGAGTTTCCGGTTATGCCAAGTTCCGAAAATGGCGGCGGAATCGGTTCAGCTGGCGGAGGAGCAACTGCCACCAGAGGCGGAACAGTCAGTTACAATGAATGTCAAAAGAACCACGCAGCCAGCATCGGCGGTCACGCCATTGATGGATGTTGTGAGTTTTTAGCAGCTGGAGAAGAAGGAACACCACAAGCCCTAATTTGCGCTGCATGTAACTGTCACCGGAATTTTCATCGCAAAGAAATCGCCGGCAGAATCGCTTCTCATCTTCATCAACTACCCCCTTACTGCCACCCTGCAGCGCTACCTGCTCCGCCTGGATTCCACCACCGCTACGGAGTAACCACACCGGTATCACAGCAGCGAACCTTAGCTCCTCCACCGGTAACTCCACGTGATGACGTGTCAATTCCGAGTAGCAGCGGTGGCAGTGGAATGAAGAAAAGGTTTAGAACTAAGTTCACGCCGGAGCAAAAGGATAAGCTGCTTGCATTTGCGGAGAGAATTGGGTGGAGAATTCAGAAGGAAGATGAAGGTGCAATCCAACAATTCTGTGCTGAGAATTCTATTAAGAAAAATGTGCTTAAGGTTTGGATGCACAATAACAAAAAACACAAGAAACCCTAA 627 0.4912 MEFPVMPSSENGGGIGSAGGGATATRGGTVSYNECQKNHAASIGGHAIDGCCEFLAAGEEGTPQALICAACNCHRNFHRKEIAGRIASHLHQLPPYCHPAALPAPPGFHHRYGVTTPVSQQRTLAPPPVTPRDDVSIPSSSGGSGMKKRFRTKFTPEQKDKLLAFAERIGWRIQKEDEGAIQQFCAENSIKKNVLKVWMHNNKKHKKP* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0925 208 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 32 82 IPR006456 -
Mal1g0925 208 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 25 205 - -
Mal1g0925 208 SUPERFAMILY Homeodomain-like 137 205 IPR009057 -
Mal1g0925 208 Gene3D - 134 207 - -
Mal1g0925 208 Pfam ZF-HD protein dimerisation region 30 82 IPR006456 -
Mal1g0925 208 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g0925 208 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 25 205 - -
Mal1g0925 208 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 32 81 IPR006456 -
Mal1g0925 208 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 147 204 IPR006455 -
Mal1g0925 208 MobiDBLite consensus disorder prediction 120 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0925 Mal-Chr1 11066206 11066832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0925 30 203 ZF-HD Transcription Factor Family AT4G24660 54.286 4.39e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mal1g0925 ZF-HD_dimer 1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0925 - - gmx:100820567 243.817