Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0923 ATGGCACCAAGTTTTGATTGCGTTTCTAGCCTTCTTTGCACTGAGGAAGATAGCAGTGTTTTTGATGATGGTGAATATGGTGGTGGTTCGGTGGAGGAGGAGGTGTACGAGGATTCGTGGAATCCTAGGTCCAATCATCGGAGGAGTGAAAACTATGTTGTTCCTGATGAGTTGCCATTGCAGAGTGAAGAGTGTTTGGTTCTGATGTTGGAAAAAGAATGTCAACAATGGCCTGGTGCTGATTACTTGAATAGGTTGCAGTTTGGGGATTTGGATTTTGCGGCTAGAAATGAAGCCATCGATTGGATTCAAAAGGTTCGAGCACATTTCGGTTTTGGTCCTCTATGTGCTTATCTATCCATTAATTACATGGATCGATTCCTTTCTGCATATGAATTGCCAAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTGTAGCTTGCTTATCTTTGGCAGCCAAAGTAGAGGAAACTAATGTTCCTCAGACTCTTGATTTGCAGATTGGTGAATCCAAGTTTGTGTTTGAAGCTAAAACCATTCAGAGAATGGAGCTTCTAGTACTCAGCACATTGAAGTGGAGAATGCAAGCAATTACTCCTTTCTCCTTCATTGAATATTTCCTTTCTAAGATTAATGGTGATGACGATGATAAGAGTTCATTAAGTTCTTCAATTTCGCAATCTACTCAACTTATATCTAGCACCATTAAAGGTCTTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCAGTGGCAACATGTGTTGTGGGGGAAACCCAAGCAGTTGATAGTAGCAAATCAATTTCTACTCTGATTCAATACATAGAAAAGGAAAGATTATTGAAGTGTGTTGAAAAGGTCCAAGAGATGTCATTGAACAGTATTGTCAGTGGCAAGGATTCAAATGCATCTTCTGTCCCTAGTGTGCCTCAAAGCCCAATGGGTGTGTTGGATACATTGTGCTTCAGCTACAAAAGTGATGACACTAATGCTGGTGGTGGTGGTTCATGTTCTTCTTCACATAGTAGTAGCCCAGATGCTAAGAGGAGGAAGCTAAACAAAACCTGTGGATCAGAGCTTTTGTAG 1092 0.4121 MAPSFDCVSSLLCTEEDSSVFDDGEYGGGSVEEEVYEDSWNPRSNHRRSENYVVPDELPLQSEECLVLMLEKECQQWPGADYLNRLQFGDLDFAARNEAIDWIQKVRAHFGFGPLCAYLSINYMDRFLSAYELPKGRAWTMQLLAVACLSLAAKVEETNVPQTLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFSFIEYFLSKINGDDDDKSSLSSSISQSTQLISSTIKGLDFLEFKPSEIAAAVATCVVGETQAVDSSKSISTLIQYIEKERLLKCVEKVQEMSLNSIVSGKDSNASSVPSVPQSPMGVLDTLCFSYKSDDTNAGGGGSCSSSHSSSPDAKRRKLNKTCGSELL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0923 363 Pfam Cyclin, C-terminal domain 198 295 IPR004367 -
Mal1g0923 363 SMART Cyclin_C_2 198 325 IPR004367 -
Mal1g0923 363 Pfam Cyclin, N-terminal domain 68 195 IPR006671 -
Mal1g0923 363 CDD CYCLIN 96 188 IPR013763 -
Mal1g0923 363 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Mal1g0923 363 SMART cyclin_7 101 189 IPR013763 -
Mal1g0923 363 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 356 - -
Mal1g0923 363 PANTHER CYCLINS 1 356 IPR039361 -
Mal1g0923 363 Gene3D - 79 196 - -
Mal1g0923 363 SUPERFAMILY Cyclin-like 60 195 IPR036915 -
Mal1g0923 363 MobiDBLite consensus disorder prediction 346 363 - -
Mal1g0923 363 SUPERFAMILY Cyclin-like 180 292 IPR036915 -
Mal1g0923 363 Gene3D - 69 288 - -
Mal1g0923 363 MobiDBLite consensus disorder prediction 332 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0923 Mal-Chr1 11032431 11034592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0923 26 330 Core Cell Cycle Gene Families AT2G22490 44.548 4.86e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0923 K18810 - gmx:547739 453.751