Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0913 ATGCAAGCCTCAGGCTGCTTTCTCTTGTTCTCATTTTTCCTCTTTTCAACAGCATCATTTGTCTCTCATGCACTTTCCAAGGAAGAAGCCTCTTTCATTGTTCGTCGTCAATTGTTAACCCTTCACGAAAATGAGGATTTACCGGAAAACTATGCAGATAACTATAAAACAGATTTAACATTTCCTAATCCTCGTCTCAAAAGTGCTTACATAGCACTTCAAGCATGGAAAAAATCAATTTATTCAGACCCATCAAATTTCACAGCAGATTGGGTGGGCTCTGATGTTTGTTCTTACAATGGAGTTTTTTGTGCACCTTCTCTTGATGATCCAAAAATTGAAGTTGTAGCTGGGATTGATCTTAATAATGCAGACATTGCAGGATACATTCCTTCTGAGATTGGTTTGTTAACTGATCTTGCTCTTTTACACATAAACACAAACAGATTTTGTGGCATTCTCCCAAAAAGCTTCTCTAAGTTAAAGCTTTTGCACGAGTTGGATATTAGTAACAACCGTTTTGTTGGCGAATTCCCTACACATGTTCTTTCAATTCCAGATATTAAATTCATTGATATCAGGTTCAATGATTTTGAAGGAAAAATTCCTTCAGAGCTTTTCAGTAAAAAACTTGATGCTATATTTTTAAACAACAACAGATTCACATCAACAATACCTGAAAATTTAGGAAGTTCCCCGGCTTCAGTTGTTGTTTTGGCCAATAACCATCTTAGTGGTTGTATTCCTGCAAGCATTGGCGAAATGAAAAATACATTGAATGAGTTTGTTATGATCAATAACAACCTTACTGGTTGTTTGCCCGGAGATATTGGAAAACTTGAAAATGTAGCCGTTTTTGACGTGAGTCAGAACATATTTGTTGGCGTGTTGCCAAGGACATTCAATGGACTCAATAAAGTTGAAAGCTTGTCTATTGCAAATAACAAGCTTACTGGTTTTGTTCCAAAAAGTATTTGTAGTTTGCCTAATTTGGTGAACTTTACATTCTCTTATAACTATTTTAATGGGGAGGAAGAAGGTTGTGTGCCTACTAAAAAAGATATTTTGTTGGATGATAAGTATAACTGTATACCTGATAGGCCACAACAAAAGGCAGCAAATGATTGCAATGTGGTTATAAGTAAACCTGTTGATTGTAGCAAGGCACAATGTGGTAATGGTAACCCATCTCACTCCAATTCTCCTTCTACACCAAGTGATCAAAAGCCAACACCAACACCTAATGTTCCAAACCCAACACCAAATCCTCCAAGTGAGAACCCAACACCTTCAGTTCCAAAGCCACAACCGCAACCTACACCATCTCCCCCAAAGCCACAACCAAAACCTACACCTTCACCTTCTAACCCTTCACAAAATCCAACACCAAATACAAAGCCAACACCTTCACCTTCTCCACCAAGTGAAAGGCCAACACCAAAACCACAACCCAAACCAACCCCATCACCAAGTGAGAAGCCAACACCAAATCCACAACCGAAACCAACCCCATCATCACCATCAAATCCACCACCAAGTGAGAAACAAACACCAAAGCCCCCATCATCACCATCCAATCCACCACCAAGTGAGAAGCCAGAACCAAAACCACAACCCACACCAACCCCTTCTACACCCAAATCAGAATCACCATTTGAGGATGATCCTCACAAGGAAGCACCCAAAAGAAGAACAAGATCTCCACCACCACCAGTTCAATCCCCACCACCTCCTGTACATTCTCCTCCACCACCAGTCCACTCTCCACCACCACCAGTTCACTCACCTCCTCCACCGGTCCACTCTCCACCACCACCGGTTCATTCACCTCCTCCACCAGTTCACTCTCCACCACCACCTGTTCATTCGCCTCCTCCACCAGTACATTCTCCACCACCACCTGTTCATTCGCCTCCTCCACCAGTACATTCTCCACCACCACCCGTTCATTCACCTCCTCCACCAATCCACTCTCCACCGCCACCGGTTCACTCCCCTCCACCACCAGTTCACTCTCCTCCACCACCGGTTCACTCACCACCTCCACCCATTTTCTCACCGCCACCTACGCCAATTGCATCACCTCCTCCTCCTGTTAACGCACCACCTCCGGAAGATGATATCGTTTTACCCCCTAATTTTGGATCTTCATATGCTTCACCACCTCCACCGATCATTGCTGGATACTAA 2190 0.4301 MQASGCFLLFSFFLFSTASFVSHALSKEEASFIVRRQLLTLHENEDLPENYADNYKTDLTFPNPRLKSAYIALQAWKKSIYSDPSNFTADWVGSDVCSYNGVFCAPSLDDPKIEVVAGIDLNNADIAGYIPSEIGLLTDLALLHINTNRFCGILPKSFSKLKLLHELDISNNRFVGEFPTHVLSIPDIKFIDIRFNDFEGKIPSELFSKKLDAIFLNNNRFTSTIPENLGSSPASVVVLANNHLSGCIPASIGEMKNTLNEFVMINNNLTGCLPGDIGKLENVAVFDVSQNIFVGVLPRTFNGLNKVESLSIANNKLTGFVPKSICSLPNLVNFTFSYNYFNGEEEGCVPTKKDILLDDKYNCIPDRPQQKAANDCNVVISKPVDCSKAQCGNGNPSHSNSPSTPSDQKPTPTPNVPNPTPNPPSENPTPSVPKPQPQPTPSPPKPQPKPTPSPSNPSQNPTPNTKPTPSPSPPSERPTPKPQPKPTPSPSEKPTPNPQPKPTPSSPSNPPPSEKQTPKPPSSPSNPPPSEKPEPKPQPTPTPSTPKSESPFEDDPHKEAPKRRTRSPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPIFSPPPTPIASPPPPVNAPPPEDDIVLPPNFGSSYASPPPPIIAGY* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0913 729 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 16 725 - -
Mal1g0913 729 PRINTS Proline rich extensin signature 435 451 - -
Mal1g0913 729 PRINTS Proline rich extensin signature 412 433 - -
Mal1g0913 729 PRINTS Proline rich extensin signature 393 405 - -
Mal1g0913 729 PRINTS Proline rich extensin signature 453 470 - -
Mal1g0913 729 Pfam Leucine rich repeat 282 339 IPR001611 GO:0005515
Mal1g0913 729 MobiDBLite consensus disorder prediction 566 709 - -
Mal1g0913 729 MobiDBLite consensus disorder prediction 550 565 - -
Mal1g0913 729 MobiDBLite consensus disorder prediction 391 406 - -
Mal1g0913 729 SUPERFAMILY L domain-like 70 347 - -
Mal1g0913 729 MobiDBLite consensus disorder prediction 391 729 - -
Mal1g0913 729 Pfam Leucine rich repeat N-terminal domain 70 104 IPR013210 -
Mal1g0913 729 Gene3D Ribonuclease Inhibitor 69 359 IPR032675 -
Mal1g0913 729 MobiDBLite consensus disorder prediction 407 546 - -
Mal1g0913 729 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0913 Mal-Chr1 10835662 10837851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0913 5 551 Trihelix Transcription Factor Family AT3G19020 53.526 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0913 - - gmx:100780677 631.328