Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0912 ATGGCTATCCGAGTTACCTTCTCCTTTTCCGGCTATGTCGCCCAAAACTTAGTTTCCTCCGCCGGCGTTCGAGTCGCGAATTCTCGTTGTGTCCAAGAGTGCTGTATCCTCTCTCGCCTCTTTGGATCCAACCAGAAATCCGATCTCGATCGTTCCGGCGGCTTTCGTAATCGGAATCTCTATTCCGATTTCACTAAACCTAGAAATTCACCTGTTTCTGCCTATTCTACCCTCGCCGGAGAGATTCTCAACGAAAGTTGTAAGAATCCGATCATCTTAGGTTTGCTTTCGATGATGAAGTCAACGGCAATTTCTGGGTCAACAACGGCGGCTATGGGTGTTATGGGTATTTCACCCTTCAAAACTTCTTCGATTATACCATTTTTGCAGGGTTCGAAGTGGCTTCCTTGTAATGAATCTGTTCCCATAGCTACAACATGGGAGGTTGATAAAGGTGGAACGCGTGTTTCTTCTAACACGGAAACGCGTTTGGGTTTGAATCAGAAAGATAATACTAGTGGTTGGATTTCGAAATTGTTGAATGTTTGTTCTGAAGATGCTAAAGCTGTTTTCACTGCTGTTACTGTTAGTTTATTGTTTAAATCGTTTTTGGCTGAACCTAAATCTATTCCTTCTTCTTCTATGTACCCAACTCTTGAAGTTGGTGATCGTGTTTTAACAGAAAAGTTTTCATTCTTCTTTAGAAAGCCTAATGTTTCTGATATTGTGATTTTCAAAGCACCATCTTGTTTGAAGGAATTTGGTTTTAGTTCATCTGATGTATTTATAAAAAGGGTTGTGGCTAAGGCTGGTGATGTTGTCGAAGTTCGTGGTGGGAAACTTCTGGTGAATGGTATTGCTGAAGAAGAGGAATTTGTTTTAGAGCCTCTTGCTTACGAGTTGCCTCCAATGGTTGTGCCAAAAGAACATGTGTTTGTGATGGGAGACAATCGTAACAAGAGTTTTGATTCTCATAACTGGGGTCCGCTGCCGATCGAGAACATTGTTGGTAGGTCCATGTTTCGCTACTGGCCTCCATCCAAAGTGGCTGACACTGTCACGGTTCATAAAGCCTCACCTGGAAATAAATCTGTGGTAGTTTCTTGA 1107 0.4237 MAIRVTFSFSGYVAQNLVSSAGVRVANSRCVQECCILSRLFGSNQKSDLDRSGGFRNRNLYSDFTKPRNSPVSAYSTLAGEILNESCKNPIILGLLSMMKSTAISGSTTAAMGVMGISPFKTSSIIPFLQGSKWLPCNESVPIATTWEVDKGGTRVSSNTETRLGLNQKDNTSGWISKLLNVCSEDAKAVFTAVTVSLLFKSFLAEPKSIPSSSMYPTLEVGDRVLTEKFSFFFRKPNVSDIVIFKAPSCLKEFGFSSSDVFIKRVVAKAGDVVEVRGGKLLVNGIAEEEEFVLEPLAYELPPMVVPKEHVFVMGDNRNKSFDSHNWGPLPIENIVGRSMFRYWPPSKVADTVTVHKASPGNKSVVVS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0912 368 ProSitePatterns Signal peptidases I serine active site. 212 219 IPR019756 GO:0004252|GO:0016021
Mal1g0912 368 Pfam Signal peptidase, peptidase S26 187 344 IPR019533 GO:0004252|GO:0006465
Mal1g0912 368 SUPERFAMILY LexA/Signal peptidase 202 349 IPR036286 -
Mal1g0912 368 Gene3D Umud Fragment, subunit A 200 358 - -
Mal1g0912 368 CDD S26_SPase_I 206 338 IPR019533 GO:0004252|GO:0006465
Mal1g0912 368 ProSitePatterns Signal peptidases I signature 3. 311 324 IPR019758 GO:0004252|GO:0016021
Mal1g0912 368 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 1 355 - -
Mal1g0912 368 PANTHER SIGNAL PEPTIDASE I 1 355 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal1g0912 368 TIGRFAM sigpep_I_bact: signal peptidase I 189 345 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal1g0912 368 PRINTS Bacterial leader peptidase 1 (S26A) family signature 203 219 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal1g0912 368 PRINTS Bacterial leader peptidase 1 (S26A) family signature 262 274 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal1g0912 368 PRINTS Bacterial leader peptidase 1 (S26A) family signature 306 325 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0912 Mal-Chr1 10822346 10824039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0912 215 345 MADS-box Gene Family AT1G29960 32.576 6.40e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0912 K03100 - gmx:100817525 527.709