Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0895 ATGAAGAGACTCAACAACACTTCAGATTCTTCAACTCCTCTCATCACAATCTCTCCATCAACAGAGGAACACAGTCCAAGGAACAAACATGTGTATGGTATGGAGTTTCAATCCATGATGTTGGATGGATTTGAAGAGGAAGGGTGTGTTGAAGAAACAAGTCATCATTCTGAGAAGAAACGTAGACTAAGAGTGGATCAAGTTAAGGCTTTGGAGAAAAATTTTGAGGTAGAAAACAAGCTTGAACCTGAAAGGAAAGAGAAGCTTGCTATAGAACTTGGGTTGCAGCCTAGACAAGTAGCGGTTTGGTTCCAAAACAGGAGAGCAAGGTGGAAGACTAAGCAGTTGGAAAGAGATTATGGTGTTCTTAAAGCTAATTATGATGCTCTTAAGCTCAAGTTTGATGCAATTGCTCAAGATAACAAAGCTTTTCACAAGGAGATTAAGGAATTGAAATCAAAGCTGGGAGAAGAAGAAAAAAGCACAATCAGTGTTTTGGTGAAGGAGGAGATAGCAATGCTTGAATCTGATGAAGACAAGCATAACCCATCTTCAGAAACATCAATTCCTAGTTCAGAATCCAAAGATCACTTGAATTATAACTGCATAATCAACAACAATGATGTTGGTATTGGTGAAGCTTCTTCACTCTTTCCAGTAGACGTTAAAGATGGTTCTTCGGACAGCGACTCTAGCGCAATTTCTTCATCCGGGGTTCTTCAAAGCCAGCACCTTTTGTTGTCTCCTGAATCTTCCTCCATGAATTGCTTCCAATATCAGAAATCATATCATGTGAAGATGGAGGAACAAAATTTCTTAAGCGCAGATGAGGCGTGCAATTTTTTCTCGGATGATCAAGCACCTACCCTACAATGGTACTGTCCTGATCAGTGGAGTTAA 900 0.3989 MKRLNNTSDSSTPLITISPSTEEHSPRNKHVYGMEFQSMMLDGFEEEGCVEETSHHSEKKRRLRVDQVKALEKNFEVENKLEPERKEKLAIELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLKFDAIAQDNKAFHKEIKELKSKLGEEEKSTISVLVKEEIAMLESDEDKHNPSSETSIPSSESKDHLNYNCIINNNDVGIGEASSLFPVDVKDGSSDSDSSAISSSGVLQSQHLLLSPESSSMNCFQYQKSYHVKMEEQNFLSADEACNFFSDDQAPTLQWYCPDQWS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0895 299 Gene3D - 53 121 - -
Mal1g0895 299 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 1 290 - -
Mal1g0895 299 SUPERFAMILY Homeodomain-like 49 116 IPR009057 -
Mal1g0895 299 CDD homeodomain 59 115 IPR001356 GO:0003677
Mal1g0895 299 MobiDBLite consensus disorder prediction 174 194 - -
Mal1g0895 299 Pfam Homeobox associated leucine zipper 114 155 IPR003106 GO:0006355|GO:0043565
Mal1g0895 299 MobiDBLite consensus disorder prediction 1 28 - -
Mal1g0895 299 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 290 IPR045224 GO:0003700
Mal1g0895 299 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Mal1g0895 299 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Mal1g0895 299 SMART HOX_1 57 118 IPR001356 GO:0003677
Mal1g0895 299 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g0895 299 PRINTS Lambda-repressor HTH signature 94 110 IPR000047 GO:0003677
Mal1g0895 299 PRINTS Lambda-repressor HTH signature 85 94 IPR000047 GO:0003677
Mal1g0895 299 Pfam Homeodomain 59 112 IPR001356 GO:0003677
Mal1g0895 299 Coils Coil 113 133 - -
Mal1g0895 299 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0895 Mal-Chr1 10636787 10638262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0895 1 299 Homeobox Transcription Factor Family AT4G40060 47.468 4.53e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal1g0895 Homeodomain 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0895 K09338 - gmx:100796213 348.977