Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0889 ATGGCCTTATTTGCACTTTTCCTCCGCCATTGCTCCTCCTACGGATACAACCGCCGTAATCCCATCACCGCCGCCGTCGATCTATTCCGCCGCGGCTTCAACCGTCAAGTCATCGACAAATGCCCTGTCCTCGTTTACTCAGCCGTGAAAGATCACAAAATCGGTAAAACAACACTTGAATGCACCGTTTGTTTGAATGAGTTTCAACACAATGACAAAATAAGGTTGCTTCCGAATTGTCATCATGTTTTTCACCAAGATTGTATTGATGTTTGGTTATTATCTCATATGAATTGTCCTGTTTGTCGTTCAAAACTCACTCATGATGTTCCCGACATTGAAATTCATATTGCCGCCGCGACGGAATCGGGTTATGAATTAACAGAGCAACAACAAGAACAGAGCAATACCGTTACGGCTTCAGAAGATGAAGAAGTAGTAATGGCTGATGAAGATGATGACATTTTCCGTTCACGGGAATTGAGAATGTTGAAAAAGTATCCGTTCCCAAGGTCACATTCAACGGGTCATTCTTTAGCGGAAAATGAGGAGAAAAATAATCATGAGGATGTGGTTCTGCATCTGCCACCTACATGGAGTTCAAAGAGAGTAAGTAACAACAACGTGGAGCGGTGGTCTTTGTCCATGACGCCACTTAGAATTAAGCAAGGAGCACTAAAACCTTGGCATGTTCCTTCAGTTTGA 705 0.4326 MALFALFLRHCSSYGYNRRNPITAAVDLFRRGFNRQVIDKCPVLVYSAVKDHKIGKTTLECTVCLNEFQHNDKIRLLPNCHHVFHQDCIDVWLLSHMNCPVCRSKLTHDVPDIEIHIAAATESGYELTEQQQEQSNTVTASEDEEVVMADEDDDIFRSRELRMLKKYPFPRSHSTGHSLAENEEKNNHEDVVLHLPPTWSSKRVSNNNVERWSLSMTPLRIKQGALKPWHVPSV* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0889 234 PANTHER RING FINGER DOMAIN-CONTAINING 1 211 - -
Mal1g0889 234 CDD mRING-H2-C3H2C2D_ZSWM2 60 103 - -
Mal1g0889 234 SMART ring_2 61 102 IPR001841 -
Mal1g0889 234 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 1 211 - -
Mal1g0889 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 109 IPR013083 -
Mal1g0889 234 Pfam Ring finger domain 60 103 IPR001841 -
Mal1g0889 234 ProSiteProfiles Zinc finger RING-type profile. 61 103 IPR001841 -
Mal1g0889 234 SUPERFAMILY RING/U-box 37 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0889 Mal-Chr1 10568262 10568997 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0889 1 218 Rapid Response to Elicitors AT3G05200 34.783 2.70e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0889 K10664 - csv:101212548 148.288