Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0881 ATGGGCCTCTCAAACTTTCCCTATGCAGCAGAAGGGGTTGTACCTGTGATTGTGATGAACACTGTTCTATCTGTGGTTCTATTGAAGAACATGTTCAGATCCATTCTTCAAGTAGTTGGATGCACATCAACAAATAATTCTTATCATACTCCAAATATTGTAGAAGAAGAACAACAAGAGTACTCCCAAGAGAGTAGTAATTCTAGGGAAAGGAGGGTGTCAATAACACAATACAAGTCATTGTGTTACAACAGGTCCAACATAGCAAGAAGTAGTAGTTGTAACAATGGATCATGTGGATGGACAACTCCTATGGTAGAGTGTTGTGTGTGTTTGTCTGGTTTTGAAGCAAATCAGGAGGTGAGTGAGTTGCCTTGCAAGCATTTCTTCCACAGAGATTGCTTAGACAAATGGTTTGATAACAAACACAGTACTTGTCCTTTATGTCGTTCTATGGACTAG 462 0.3961 MGLSNFPYAAEGVVPVIVMNTVLSVVLLKNMFRSILQVVGCTSTNNSYHTPNIVEEEQQEYSQESSNSRERRVSITQYKSLCYNRSNIARSSSCNNGSCGWTTPMVECCVCLSGFEANQEVSELPCKHFFHRDCLDKWFDNKHSTCPLCRSMD* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0881 153 SMART ringv_2 107 150 IPR011016 GO:0008270
Mal1g0881 153 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 153 IPR013083 -
Mal1g0881 153 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Mal1g0881 153 CDD mRING-H2-C3H2C2D_ZSWM2 107 150 - -
Mal1g0881 153 PANTHER F21J9.24-RELATED 1 152 - -
Mal1g0881 153 PANTHER - 1 152 IPR044249 -
Mal1g0881 153 SMART ring_2 108 149 IPR001841 -
Mal1g0881 153 Pfam Ring finger domain 107 150 IPR001841 -
Mal1g0881 153 SUPERFAMILY RING/U-box 107 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0881 Mal-Chr1 10525978 10526439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0881 1 151 C3H Transcription Factor Family AT2G04240 30.723 1.31e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0881 K16285 - tcc:18609579 179.489