Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0874 ATGTTAGGAGAAGAGGATAAGGAGAAAAAACTCTCCATTAGGAGAACCTATTCACGTTCAGTTTCATGGACAGATCGTTCTCCAAATAGCCATAAACCACCACTAGGAAATAGTAAAGCAAGACCACTTTTACCACCTCTTCAACCTCTTTCAATCAACAAACGTAGCGTTGAAGAATGGCCAAGTGCTGGATCTGATGATCTTGGTGTTTGGCCACTTCCACAAACTCCAAGAGGGTCTATTACTATCAATGAACCCACCCAAGATTTTCAGTTCAAAAGAGATAAATTAGCTTTCTTTGATAAAGAGTGTTCCAGAATTGCTGAACATATTTACTTAGGAAGTGACACGGTGGCCAAAAACCATGAACTTCTCAGACAGAAAGGAATAACACATGTGCTTAACTGTGTTGGTTTTGTTTGTCCTGAGTATTTCAAAAGTGATTTTGAGTACAAAACACTTTGGTTGCAGGATAGTCCAACTGAGGATATAACAAGTATTCTCTATGATGTGTTTGATTACTTTGAAGATGTTAGAGAACAAGGTGGTCGTGTTCTTGTTCATTGTTGTCAAGGGGTTTCTCGATCGACGGCTTTGGTGATTGCTTATCTCATGTGGAGGAAAGGACAGAGTTTTGAAGATGCTTTTCAGTTTGTGAAAACTGCAAGGGGAGTCACAAATCCAAACATGGGTTTTGCTTGTCAACTTTTGCAGTGTCAGAAACGTGTACATGCTATGCCTGCAAGTCCTAATTCTGTTTTAAGGATGTATCGAATGGCTCCTCACTCTCCTTACGATCCTCTTCATCTTGTTCCTAAGATGGTTAACCAACCAGGTTCACTAGCACTTGATTCACGCGGCGCTTTTATTGTTCATGTTCCTTCTGCTATTTATGTGTGGATTGGGAAAAATTGTGACTTGGTTATGTCCTGCAACGCAAAGAGTGCGGCGTTTCAGGTTGTGCGCTATGAGGGAGCAAAGGGTCCAATTCTGAGCATCCGTGAAGATCAAGAATCGACAGAGTTTTGGATTGCTCTTTCTGATCAGCAACGTTTGTCAGGTGATTCTGATAAACAACTGGTTTTGCCTACTGAAAAGATGGAGACTGGTCTAAGAAAAGTTGATGCTTATGATTTGGATTTTGAGATTTTCCACAAGGCAATTTCTGGTGGGGTTGTTCCACCTTTTTCTGCAGCTAATTCTGGATCAGAAACTTGTGTTCCTGCTACAGAACATGGTTGGGCAAGATTGAGGAGGAAATTTGCTAGTGGTGTCATGAAAGAAATCTTAACATCCCCCAAATGGAAGTGTGATGTGATTATGGAGGAAGAAAAACAAGATTTTGCAGCTGATGATCCCTTGTCGGCGTCGCCATCATCAAGTCATCCAAGTGACTGTGGTTCTCCAGATTCCTTTGAATGTTATCCAAGCAGCTTAAGCAACGCAAAAGATATTGATGAAGCCATGGACTTGTCGGAATCTGATCCTGGTGTTGCTTCTTTGATGCCACTATCTCCTTGTGGCACATCTTTTCCTAGTTGTTTTCCAAGCAGCAGCCCAAGATTCAATTCCAAGTCGCCAACACTTTCACCTTCAAGTTCTGATTATGCAAGTTCGTTTACATTTTCACCTTCCTCTACCAATTGGTCAGACTTGTCATTCATGTCTTCTCGGCAGCCATCACCATCCGGCCAGGAATCAATTGAACCCTTTTATGTTAAAGACGTGACTTTCTCAACAAGTTCCACTTTACTTAACAAAGAAGTTCTCTCTTCACCTTCCGAATCATTTTCGACTGATCACACCTTGGGAGGGGAAAACTCCCATTTGTCATCGAAAGGATCTTTTTTCTCTATTGCTGAGCGTAGAGGGAGTAGTATACCGCCTCGGATGATGCTACCCTCTGTCAATGAATCCTCTAAGGTCCGCAAGAACCTGGAGGAATGCACTTACTAA 1956 0.4187 MLGEEDKEKKLSIRRTYSRSVSWTDRSPNSHKPPLGNSKARPLLPPLQPLSINKRSVEEWPSAGSDDLGVWPLPQTPRGSITINEPTQDFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQKGITHVLNCVGFVCPEYFKSDFEYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTALVIAYLMWRKGQSFEDAFQFVKTARGVTNPNMGFACQLLQCQKRVHAMPASPNSVLRMYRMAPHSPYDPLHLVPKMVNQPGSLALDSRGAFIVHVPSAIYVWIGKNCDLVMSCNAKSAAFQVVRYEGAKGPILSIREDQESTEFWIALSDQQRLSGDSDKQLVLPTEKMETGLRKVDAYDLDFEIFHKAISGGVVPPFSAANSGSETCVPATEHGWARLRRKFASGVMKEILTSPKWKCDVIMEEEKQDFAADDPLSASPSSSHPSDCGSPDSFECYPSSLSNAKDIDEAMDLSESDPGVASLMPLSPCGTSFPSCFPSSSPRFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFMSSRQPSPSGQESIEPFYVKDVTFSTSSTLLNKEVLSSPSESFSTDHTLGGENSHLSSKGSFFSIAERRGSSIPPRMMLPSVNESSKVRKNLEECTY* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0874 651 MobiDBLite consensus disorder prediction 449 469 - -
Mal1g0874 651 Gene3D Severin 256 353 IPR029006 -
Mal1g0874 651 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 641 - -
Mal1g0874 651 MobiDBLite consensus disorder prediction 1 15 - -
Mal1g0874 651 Gene3D Protein tyrosine phosphatase superfamily 82 245 IPR029021 -
Mal1g0874 651 SMART dsp_5 103 242 IPR020422 GO:0006470|GO:0008138
Mal1g0874 651 MobiDBLite consensus disorder prediction 453 469 - -
Mal1g0874 651 CDD DSP 104 238 - -
Mal1g0874 651 SUPERFAMILY Actin depolymerizing proteins 249 353 - -
Mal1g0874 651 ProSiteProfiles Dual specificity protein phosphatase domain profile. 103 245 IPR020422 GO:0006470|GO:0008138
Mal1g0874 651 ProSitePatterns Tyrosine specific protein phosphatases active site. 187 197 IPR016130 GO:0016311|GO:0016791
Mal1g0874 651 MobiDBLite consensus disorder prediction 1 46 - -
Mal1g0874 651 Pfam Dual specificity phosphatase, catalytic domain 111 241 IPR000340 GO:0008138|GO:0016311
Mal1g0874 651 MobiDBLite consensus disorder prediction 628 651 - -
Mal1g0874 651 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 162 223 IPR000387 GO:0016311|GO:0016791
Mal1g0874 651 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 245 IPR029021 -
Mal1g0874 651 MobiDBLite consensus disorder prediction 16 34 - -
Mal1g0874 651 PANTHER MKPA PROTEIN 1 641 - -
Mal1g0874 651 MobiDBLite consensus disorder prediction 595 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0874 Mal-Chr1 10454562 10457367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0874 27 139 Protein tyrosine phosphatase (PTP) family AT3G55270 51.587 1.43e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0874 - - gmx:100775448 918.302