Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0868 ATGGGAAACAAAGGTGGATTTTTGCGTTATGCAGATGGCGTTGACAAATTGCTATTATTCTTTGGAACTTTGGGTTGCATTGGTGATGGCATACAAACTCCAATCACTATGCTGGTTCTTGGTAGTTTAATAGATGATTATGCTCGTGGTGGTTCTGAAAATACTGTGTCCATTAATGCTATCAACAAGTATGCTCTCAAGCTAATTGGTGTTGCCATTGGAGTTGCTTTCTCTGCTTTTATTGTTGGAGTATGCTGGACAAGAACTGCAGAAAGACAAACTTCGCGGATGCGAATCGAATATCTTAAATCAATCCTAAGGCAAGAGGTTGGTTTCTTTGACAAGCAAACTAACTCTTCCACAACCTTCCAAGTAATTGCCACCATAACTTCTGATGCTCAAACAATACAAGACACCATGTCTGATAAGGTACCTAATTGTCTTGTTCACCTCTCAGCATTCTTCTCTAGCTTTATAGTGGCACTATTCCTCTCTTGGAGACTTGCAGTAGCTGCTTTTCCATTTTCAATTATGATGATCATGCCAGCACTCATATTTGGGAATGCTATGAAAGAGATAGGTGGTAAAATGAAGGATGCGTTCGGAGTTGCTGGTAGCATAGCAGAACAAGCAATCTCATCAGTTCAAACGGTTTATTCGTATGTAGGTGAGAAACAAACACTGAAAAGGTTTAGCTCTGCTCTTGAAACATGTATGCAGCTTGGCATAAAGCAAGGTCAAACAAAGGGAGTGGTTATTGGTAGTTTTGGATTGCTATATGCTACTTGGGCATTCCAATCTTGGGTTGGGAGTGTTCTTGTTAGGACCAAAGGAGAAAAGGGTGGAAATGTGTTTTGTGCTGAAATATGTATTATTTGGGGAGGATTGTCTCTGATGAGTGCACTACCAAATCTGGCTTCCATATTAGAGGCAACAATAGCTGCTACTCGGATTTTCGAGATGATTGATAGAAAGCCAACTATAATAAACTCTACCAAAGAAAAAGGAAGGATTTTGAAGCATACAAGAGGAGAGATTACATTTAAAGATGTTGAGTTTAATTACCCTTCAAGGCCAGATACACTGATTCTCCAAGGACTCAATCTTAAAGTTCAGGCATGTAAAACAGTAGGCCTAGTTGGAGGAAGTGGTTCTGGAAAATCTACTATAATATCTTTGCTTGAAAGATTCTATGATCCTTCATGTGGTGAGATATTGCTTGATGGTTTTGATATAAAGAAACTACACCTCAAGTGGTTTAGGTCCCTGATAGGATTGGTAAATCAAGAGCCAATTCTCTTTGCAACATCCATAAGAGAGAACATTCTATTTGGAAAGGAAGGAGCTTCAATGGAGGATGTCATTACTGCTGCAAAAGCAGCAAATGCACATGATTTCATTATTAAACTTCCAAATGGATATGAAACTCAAGTAGGACAACTAGGAGCTCAATTGTCTGGAGGACAAAAACAAAGGATTGCTATTGCAAGGGCTTTAATAAGAGATCCTAAAATTCTACTACTTGATGAAGCCACTAGTGCTCTGGATTCACAATCTGAAAGAGTAGTACAAGATGCACTTGACTTGGCTTCTAGAGGTAGAACAACAATCATCATAGCTCATCGCCTTTCCACGATTCGTAAGGCCGATTCAATAGTAGTACTTCAATCAGGAAAGGTGGTTGAAAGTGGTTCACACAATGAGCTACTCCAACTAAACAATGGACAAGGTGGGATTTACACCAAAATGCTACATTTGCAACAAACAAGTCAAAATGAAAATGCACAGCATCAAATAAACAAGAGCCCTCGTGCAATGGAAAATCTAATAACAAGTTCAAATCCAAGCCGGAAGAGTACTCCAATTCATCATTCATTTAGCCCTGCACAACCATTTAGTCCGATATATTCAATCAGTGTTATCGAGTCTAGCTTTGATGACGACTACAGCAGTGAACACTTGGAGAAACCTTACAGTTCAAACATCTCTCACTGGCGTTTACTACAAATGAATGCTCCTGAATGGAAGCATGCTTTGTTAGGATGTTTAGGTGCCATTGGCGCAGGAATGTGCCAGCCATTTTATTCCTATTGCTTAGGGATAGTTGCTTCTGTCTACTTCATAGATGATAACTCTCGCATCAAATCACAAATCAGGTTGTACTCAATCATCTTCTGCTGCATAGCCGCTGTGAACTTTGTCTCAGGCCTCATTCAACATCACAATTTTTCAATCATGGGAGAGCGTTTGCTGAAAAGGGTGCGCGAGAATTTGCTAGAGAAAGTGTTAACCTTTGAGATAGGATGGTTTGATCAAGAGGAGAACACAAGTGCAGCAATCTGTGCACGTTTGGCGACCGAAGCTAACTTGGTTCGATCCCTCGTTGCAGAACGAATGTCGTTATTGGTTCAAGTCTCCGTAACTGCATCGCTGGCTTTTGTACTCGGTTTAATTGTTACATGGAGGATAGCTATTGTCATGATCGCTATGCAGCCTTTGATCATTGCATGTCTCTATTCAAAAACCGTTCTCATGAAGAGTATGTCAGGAAAAGCAAAAAATGCTCAAAGAGATGCTAGTCAACTAGCAATGGAAGCTACTACCAACCACGGGACTATCGCCGCATTCTCCTCCGAGAAAAGAATAATAAATTTGTTCAAAACTGCTATGGATGGTCCCAAGAAGGAAAGCATCAAGCAATCATGGATTTCAGGTTCCATATTGTCTATGTCACAGTTCATTACAACAGCATCTATAGCTTTGACTTTTTGGTATGGAGGCATATTATTAAATCGGAAACTAGTCGAATCAAAGCATCTCTTGCAAGTTTTCCTCATTTTGATGGGAACTGGAAGACAAATTGCTGACACAGGAAGCATGACTTCTGACATAGCTAAAAGTGGAAGAGCCATTAGTTCAGTATTTGCAATACTTGATAGGAAAACACAGATTGAACCTGAAGATACAAGACACAGAAAGTTCAAAAAAACTATGAAAGGTGAAATGAAACTGAAAGATGTGTTTTTCTCATATCCTGCAAGACCAGATCAAATGATTCTCAAGGGTCTTAGTCTTGAGATTGAAGCTGGCAAAACAGTTGCATTAGTTGGACAGAGTGGCTCAGGAAAATCCACCATCATTGGTTTAATTGAAAGATTTTATGACCCTATTAAGGGATCCATATTCATAGACAATTGTGATATCAAAGAACTTCATTTGAAAAGTTTGAGATCACATATTGCATTGGTGAGTCAAGAGCCTACTCTCTTTGCTGGAACCATACGTGACAACATTGTATATGGGAAGGAAGATGCATCAGAGGCTGAAATAAGAAGGGCTGCACGTCTTGCAAATGCTCATGACTTTATAAGTGCAATGAGAGAAGGGTATGATACATACTGTGGAGAAAGAGGAGTGCAGCTATCAGGAGGGCAGAAGCAAAGGATAGCAATAGCTCGAGCAATGTTGAAGAATCCATCAATTCTTCTGTTAGATGAAGCAACAAGTGCTCTTGACAGTGTATCAGAGAATCTTGTACAGGAAGCATTGGAGAAAATGATGGTTGGAAGAACATGTGTTGTTATAGCTCACCGTTTGTCAACAATACAAAGTGTTGATTCCATAGCTGTGGTTAAAAATGGCAAGGTGGTGGAACAAGGTTCTCACTCACAGTTACTGAATGATAGATCAAATGGGACATATTACTCTTTAATTAGGCTACAACAAAGTCATTAA 3735 0.3963 MGNKGGFLRYADGVDKLLLFFGTLGCIGDGIQTPITMLVLGSLIDDYARGGSENTVSINAINKYALKLIGVAIGVAFSAFIVGVCWTRTAERQTSRMRIEYLKSILRQEVGFFDKQTNSSTTFQVIATITSDAQTIQDTMSDKVPNCLVHLSAFFSSFIVALFLSWRLAVAAFPFSIMMIMPALIFGNAMKEIGGKMKDAFGVAGSIAEQAISSVQTVYSYVGEKQTLKRFSSALETCMQLGIKQGQTKGVVIGSFGLLYATWAFQSWVGSVLVRTKGEKGGNVFCAEICIIWGGLSLMSALPNLASILEATIAATRIFEMIDRKPTIINSTKEKGRILKHTRGEITFKDVEFNYPSRPDTLILQGLNLKVQACKTVGLVGGSGSGKSTIISLLERFYDPSCGEILLDGFDIKKLHLKWFRSLIGLVNQEPILFATSIRENILFGKEGASMEDVITAAKAANAHDFIIKLPNGYETQVGQLGAQLSGGQKQRIAIARALIRDPKILLLDEATSALDSQSERVVQDALDLASRGRTTIIIAHRLSTIRKADSIVVLQSGKVVESGSHNELLQLNNGQGGIYTKMLHLQQTSQNENAQHQINKSPRAMENLITSSNPSRKSTPIHHSFSPAQPFSPIYSISVIESSFDDDYSSEHLEKPYSSNISHWRLLQMNAPEWKHALLGCLGAIGAGMCQPFYSYCLGIVASVYFIDDNSRIKSQIRLYSIIFCCIAAVNFVSGLIQHHNFSIMGERLLKRVRENLLEKVLTFEIGWFDQEENTSAAICARLATEANLVRSLVAERMSLLVQVSVTASLAFVLGLIVTWRIAIVMIAMQPLIIACLYSKTVLMKSMSGKAKNAQRDASQLAMEATTNHGTIAAFSSEKRIINLFKTAMDGPKKESIKQSWISGSILSMSQFITTASIALTFWYGGILLNRKLVESKHLLQVFLILMGTGRQIADTGSMTSDIAKSGRAISSVFAILDRKTQIEPEDTRHRKFKKTMKGEMKLKDVFFSYPARPDQMILKGLSLEIEAGKTVALVGQSGSGKSTIIGLIERFYDPIKGSIFIDNCDIKELHLKSLRSHIALVSQEPTLFAGTIRDNIVYGKEDASEAEIRRAARLANAHDFISAMREGYDTYCGERGVQLSGGQKQRIAIARAMLKNPSILLLDEATSALDSVSENLVQEALEKMMVGRTCVVIAHRLSTIQSVDSIAVVKNGKVVEQGSHSQLLNDRSNGTYYSLIRLQQSH* 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0868 1244 SMART AAA_5 1029 1215 IPR003593 -
Mal1g0868 1244 SMART AAA_5 373 559 IPR003593 -
Mal1g0868 1244 CDD ABC_MTABC3_MDL1_MDL2 346 587 - -
Mal1g0868 1244 Gene3D ABC transporter type 1, transmembrane domain 658 968 IPR036640 GO:0005524|GO:0016021
Mal1g0868 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 995 1241 IPR027417 -
Mal1g0868 1244 Gene3D - 1000 1242 IPR027417 -
Mal1g0868 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 346 582 IPR003439 GO:0005524
Mal1g0868 1244 CDD ABC_MTABC3_MDL1_MDL2 1004 1241 - -
Mal1g0868 1244 SUPERFAMILY ABC transporter transmembrane region 666 985 IPR036640 GO:0005524|GO:0016021
Mal1g0868 1244 Pfam ABC transporter transmembrane region 680 945 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g0868 1244 Pfam ABC transporter transmembrane region 20 277 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g0868 1244 ProSitePatterns ABC transporters family signature. 1141 1155 IPR017871 GO:0005524
Mal1g0868 1244 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 11 1242 IPR039421 -
Mal1g0868 1244 SUPERFAMILY ABC transporter transmembrane region 7 326 IPR036640 GO:0005524|GO:0016021
Mal1g0868 1244 PANTHER OS04G0481700 PROTEIN 11 1242 - -
Mal1g0868 1244 CDD ABC_6TM_Pgp_ABCB1_D2_like 668 984 - -
Mal1g0868 1244 Pfam ABC transporter 1020 1169 IPR003439 GO:0005524
Mal1g0868 1244 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 318 - -
Mal1g0868 1244 Gene3D - 336 588 IPR027417 -
Mal1g0868 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1002 1238 IPR003439 GO:0005524
Mal1g0868 1244 ProSitePatterns ABC transporters family signature. 485 499 IPR017871 GO:0005524
Mal1g0868 1244 Gene3D ABC transporter type 1, transmembrane domain 969 999 IPR036640 GO:0005524|GO:0016021
Mal1g0868 1244 Gene3D ABC transporter type 1, transmembrane domain 8 607 IPR036640 GO:0005524|GO:0016021
Mal1g0868 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 337 587 IPR027417 -
Mal1g0868 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 679 966 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g0868 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 20 310 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g0868 1244 Pfam ABC transporter 364 513 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0868 Mal-Chr1 10339414 10345176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0868 680 1243 Calmodulin-binding Proteins AT2G36910 38.516 1.15e-114 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0868 K05658 - gmx:100804664 1993.78