Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0862 ATGGCATTTGCTACTATACTAATGTTCCATTTCTTACTTCTTTCTCCAACTTTGATTTATTCTTCTCCAGTTGAAGATCCTGAGTTAGTGGTCCAAGAAGTGCAGAAGAGCATCATTGAGAATCAGAACAGAAGAAAATTGGGCTATTATGCTTGTGGCACAAACAACCCAATTGATGATTGTTGGAGATGTGACCCCAATTGGGAGAAAAACCGCAAGCGTCTAGCAGAATGTGCTATTGGATTCGGTAGACGTGCAATTGGAGGTAGAGATGGCAAATACTACATGGTCATTGACTCAAGTGATGACCCTGTGAATCCCAAGCCAGGAACACTACGACATGCTGTTATCCAAGAAGAGCCTTTATGGATCATTTTCAAACATGACATGGTGATTAAGCTAAAGATGGATCTTCTTATGAATTCTTTCAAAACAATTGATGGTAGAGGTGCAAATGTACACATTGCTGAAGGACCATGTATTAGAATACAAGAAAAGACTAATATTATAATTCATGGGATACATATTCATCATTGTGTACGAGGTGGTAGTGGCTATGTGAGTGACTCTCCTAACCATCGTGTAAGGAAAGAAAGATCGGATGGTGATGGGATCACAATCTATGGTGGAGCTCATATTTGGGTGGATCATTGTTCTTTGTCAAAATGTTTTGATGGTTTGATTGATGTTGTTCATGGATCAACGGCTATTACCATTTCTAACAATTATATGACGCATCACAACAAAGTCATGCTCTTGGGACATAGTGATTCCTATGAAGAGGATAAAAATATGCAAGCTACTATTGCTTTCAATCATTTTGGTGAAGGGCTTGGGGGAAGAATGCCAAGATGTAGGTTCGGATACTTCCATGTAGTGAACAACGATTACACACATTGGCAACAGTATGCAATTGGAGGAAGTTCGTCCCCAACTATTTTCAGTCAAGGCAACAGATTTCTTGCTCCGGATGATGATGACCACAAAGAGATCACGAAGCATTTTTACTCATCAAAGGGTGAGTGGCAGAACTGGAACTGGAGGTCTGAAGGAGATCTAATGTTGAATGGAGCATTCTTCATATCTTCTGGTGCGGGAGCATCTTCTTCGAGATATGCCAAAGCCTCAAGCATGTCAGCACGACCACCTATGCTTGTGGCTTCAATGACAGCAGGAGCTGGAGTACTTAGATGCAAAACGGGTTACCAATGCTACTACTAG 1221 0.4095 MAFATILMFHFLLLSPTLIYSSPVEDPELVVQEVQKSIIENQNRRKLGYYACGTNNPIDDCWRCDPNWEKNRKRLAECAIGFGRRAIGGRDGKYYMVIDSSDDPVNPKPGTLRHAVIQEEPLWIIFKHDMVIKLKMDLLMNSFKTIDGRGANVHIAEGPCIRIQEKTNIIIHGIHIHHCVRGGSGYVSDSPNHRVRKERSDGDGITIYGGAHIWVDHCSLSKCFDGLIDVVHGSTAITISNNYMTHHNKVMLLGHSDSYEEDKNMQATIAFNHFGEGLGGRMPRCRFGYFHVVNNDYTHWQQYAIGGSSSPTIFSQGNRFLAPDDDDHKEITKHFYSSKGEWQNWNWRSEGDLMLNGAFFISSGAGASSSRYAKASSMSARPPMLVASMTAGAGVLRCKTGYQCYY* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0862 406 PRINTS Pollen allergen Amb family signature 201 222 IPR018082 -
Mal1g0862 406 PRINTS Pollen allergen Amb family signature 101 126 IPR018082 -
Mal1g0862 406 PRINTS Pollen allergen Amb family signature 345 369 IPR018082 -
Mal1g0862 406 PRINTS Pollen allergen Amb family signature 281 300 IPR018082 -
Mal1g0862 406 PRINTS Pollen allergen Amb family signature 375 398 IPR018082 -
Mal1g0862 406 PRINTS Pollen allergen Amb family signature 303 322 IPR018082 -
Mal1g0862 406 PRINTS Pollen allergen Amb family signature 137 153 IPR018082 -
Mal1g0862 406 PRINTS Pollen allergen Amb family signature 78 95 IPR018082 -
Mal1g0862 406 Pfam Pectate lyase 140 320 IPR002022 -
Mal1g0862 406 PANTHER PECTATE LYASE 18-RELATED 3 401 IPR045032 GO:0030570
Mal1g0862 406 PANTHER PECTATE LYASE 3 401 - -
Mal1g0862 406 SUPERFAMILY Pectin lyase-like 31 398 IPR011050 -
Mal1g0862 406 Gene3D - 55 397 IPR012334 -
Mal1g0862 406 SMART amb_all 129 326 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0862 Mal-Chr1 10269480 10271309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0862 1 404 Polysaccharide Lyase AT5G63180 68.473 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0862 K01728 - gmx:100801136 671.774