LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g0861	ATGGCACTTCCACTCTCATTCTTTCTACTCTCATTACTACTTCTTGTACCTTCCTTCATTCAATCTTACCCACTTCAAGATCCTCAATTAGTAGTCCAAGATGTACAAAAGAGTATTAATGATTCAAGGAGAAACTTAGCATTTCTTTCTTGTGGAAGTGGCAACCCAATTGATGATTGTTGGAGATGTGACAAAAATTGGGAAAAGAATCGTCAACGTTTAGCAGATTGTGCTATTGGATTTGGCAAGCATGCAATTGGAGGTAGAGATGGTAAAATATATGTAGTAACTGATCCTGGTGATCATGCTGTGAATCCAAAGCCAGGAACATTAAGATATGGTGTTATTCAAGAGGAACCATTGTGGATAATCTTCAAACGTGACATGGTGATTAAGCTTAAACAAGAGTTAATGATGAATTCTTTCAAAACAGTTGATGGTAGAGGAACAAATGTGCACATTGCTGGTGGACCTTGTATTACCGTACAATTTGTGACAAATATTATTATTCATGGGATTAATATACATGATTGTAAAAGAGGTGGGAATACTTATGTGAGAGATACACCTACACATTATGGTTTTAGGACACTTTCTGATGGTGATGGTGTGTCTATTTTTGGTGGGAGTCATGTTTGGGTGGATCATTGCTCTCTTTCTAATTGCCGTGATGGATTAATTGATGTTATTCATGGATCTACAGCTATTACTATTTCTAATAATTTCATGACTCGTCATAATAAGGTTATGCTTTTGGGTCATAGTGATAGTTTCACTAGAGATAAGAATATGCAAGTTACTATTGCTTTTAACCATTTTGGAGAAGGACTAGTTCAAAGAATGCCAAGATGTAGGCATGGATATTTTCATGTGGTGAACAATGACTACACACATTGGCAAATGTATGCCATAGGAGGAAGTGCTAATCCAACTATCAACAGCCAAGGCAATAGATTTCTTGCTTCCAATGACAATACCTTCAAAGAGGTGACAAAGCGCGAGAATGCAGGACAGAGTCAATGGAAGAATTGGAATTGGAGATCCAGTGGTGATTTGATGTTAAACGGTGCATTCTTTAGGCCATCAGGAGCAGGTTCATCTTCAAGCTATGCTAGAGCATCTAGTTTAGCAGCAAAACCATCTTCCCTAGTAGCATCTCTCACTGCATCAGCTGGATCACTAAACTGCAGAAAAGGCTCTCGCTGCTGA	1209	0.3821	MALPLSFFLLSLLLLVPSFIQSYPLQDPQLVVQDVQKSINDSRRNLAFLSCGSGNPIDDCWRCDKNWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDPGDHAVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTVDGRGTNVHIAGGPCITVQFVTNIIIHGINIHDCKRGGNTYVRDTPTHYGFRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDVIHGSTAITISNNFMTRHNKVMLLGHSDSFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSANPTINSQGNRFLASNDNTFKEVTKRENAGQSQWKNWNWRSSGDLMLNGAFFRPSGAGSSSSYARASSLAAKPSSLVASLTASAGSLNCRKGSRC*	403

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g0861	402	Gene3D	-	54	395	IPR012334	-
	Mal1g0861	402	SUPERFAMILY	Pectin lyase-like	55	393	IPR011050	-
	Mal1g0861	402	PANTHER	PECTATE LYASE 18-RELATED	5	399	IPR045032	GO:0030570
	Mal1g0861	402	SMART	amb_all	128	325	IPR002022	-
	Mal1g0861	402	PRINTS	Pollen allergen Amb family signature	77	94	IPR018082	-
	Mal1g0861	402	PRINTS	Pollen allergen Amb family signature	136	152	IPR018082	-
	Mal1g0861	402	PRINTS	Pollen allergen Amb family signature	100	125	IPR018082	-
	Mal1g0861	402	PRINTS	Pollen allergen Amb family signature	302	321	IPR018082	-
	Mal1g0861	402	PRINTS	Pollen allergen Amb family signature	280	299	IPR018082	-
	Mal1g0861	402	PRINTS	Pollen allergen Amb family signature	373	396	IPR018082	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g0861	Mal-Chr1	10261453	10262999	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g0861	5	402	Polysaccharide Lyase	AT5G63180	75.000	0.0	628

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g0861	K01728		-	gmx:100816256	729.554

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