Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0861 ATGGCACTTCCACTCTCATTCTTTCTACTCTCATTACTACTTCTTGTACCTTCCTTCATTCAATCTTACCCACTTCAAGATCCTCAATTAGTAGTCCAAGATGTACAAAAGAGTATTAATGATTCAAGGAGAAACTTAGCATTTCTTTCTTGTGGAAGTGGCAACCCAATTGATGATTGTTGGAGATGTGACAAAAATTGGGAAAAGAATCGTCAACGTTTAGCAGATTGTGCTATTGGATTTGGCAAGCATGCAATTGGAGGTAGAGATGGTAAAATATATGTAGTAACTGATCCTGGTGATCATGCTGTGAATCCAAAGCCAGGAACATTAAGATATGGTGTTATTCAAGAGGAACCATTGTGGATAATCTTCAAACGTGACATGGTGATTAAGCTTAAACAAGAGTTAATGATGAATTCTTTCAAAACAGTTGATGGTAGAGGAACAAATGTGCACATTGCTGGTGGACCTTGTATTACCGTACAATTTGTGACAAATATTATTATTCATGGGATTAATATACATGATTGTAAAAGAGGTGGGAATACTTATGTGAGAGATACACCTACACATTATGGTTTTAGGACACTTTCTGATGGTGATGGTGTGTCTATTTTTGGTGGGAGTCATGTTTGGGTGGATCATTGCTCTCTTTCTAATTGCCGTGATGGATTAATTGATGTTATTCATGGATCTACAGCTATTACTATTTCTAATAATTTCATGACTCGTCATAATAAGGTTATGCTTTTGGGTCATAGTGATAGTTTCACTAGAGATAAGAATATGCAAGTTACTATTGCTTTTAACCATTTTGGAGAAGGACTAGTTCAAAGAATGCCAAGATGTAGGCATGGATATTTTCATGTGGTGAACAATGACTACACACATTGGCAAATGTATGCCATAGGAGGAAGTGCTAATCCAACTATCAACAGCCAAGGCAATAGATTTCTTGCTTCCAATGACAATACCTTCAAAGAGGTGACAAAGCGCGAGAATGCAGGACAGAGTCAATGGAAGAATTGGAATTGGAGATCCAGTGGTGATTTGATGTTAAACGGTGCATTCTTTAGGCCATCAGGAGCAGGTTCATCTTCAAGCTATGCTAGAGCATCTAGTTTAGCAGCAAAACCATCTTCCCTAGTAGCATCTCTCACTGCATCAGCTGGATCACTAAACTGCAGAAAAGGCTCTCGCTGCTGA 1209 0.3821 MALPLSFFLLSLLLLVPSFIQSYPLQDPQLVVQDVQKSINDSRRNLAFLSCGSGNPIDDCWRCDKNWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDPGDHAVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTVDGRGTNVHIAGGPCITVQFVTNIIIHGINIHDCKRGGNTYVRDTPTHYGFRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDVIHGSTAITISNNFMTRHNKVMLLGHSDSFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSANPTINSQGNRFLASNDNTFKEVTKRENAGQSQWKNWNWRSSGDLMLNGAFFRPSGAGSSSSYARASSLAAKPSSLVASLTASAGSLNCRKGSRC* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0861 402 Gene3D - 54 395 IPR012334 -
Mal1g0861 402 SUPERFAMILY Pectin lyase-like 55 393 IPR011050 -
Mal1g0861 402 PANTHER PECTATE LYASE 18-RELATED 5 399 IPR045032 GO:0030570
Mal1g0861 402 SMART amb_all 128 325 IPR002022 -
Mal1g0861 402 PRINTS Pollen allergen Amb family signature 77 94 IPR018082 -
Mal1g0861 402 PRINTS Pollen allergen Amb family signature 136 152 IPR018082 -
Mal1g0861 402 PRINTS Pollen allergen Amb family signature 100 125 IPR018082 -
Mal1g0861 402 PRINTS Pollen allergen Amb family signature 302 321 IPR018082 -
Mal1g0861 402 PRINTS Pollen allergen Amb family signature 280 299 IPR018082 -
Mal1g0861 402 PRINTS Pollen allergen Amb family signature 373 396 IPR018082 -
Mal1g0861 402 PRINTS Pollen allergen Amb family signature 200 221 IPR018082 -
Mal1g0861 402 PRINTS Pollen allergen Amb family signature 344 368 IPR018082 -
Mal1g0861 402 Pfam Pectate lyase 134 319 IPR002022 -
Mal1g0861 402 PANTHER PECTATE LYASE 5 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0861 Mal-Chr1 10261453 10262999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0861 5 402 Polysaccharide Lyase AT5G63180 75.000 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0861 K01728 - gmx:100816256 729.554