Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0858 ATGGCGGCTTTGTTACCTTGCACGCCGACTATACTCTCTGCTCCGTTCGGGAACCGGAGCAGAACCAATCATATTCCACTTCGACCTCACTCCCACGCCTTCCCAGGCTCAACCAAACGCTTTCTTCGCGGTTCTCTTTCCGTTGCCCGGTTCGGATTTCATCCTGGTTTTTTGCCCGAACCGGATGAAGCCGAATTCGTTCTCAGGGAATTGTTTAACCGTGCGGAAGGTTTTCTTTACACAATTGCCGATGCTGCTGTTTCTTCTTCCGATACGGTGGTAACCACCACCACTAAACAGAATAATGATTGGTTTTCTGGAATTACTAATTACATGGAGACTATTCTCAAGGTACTCAAGGATGGGCTTTCTACTTTGCATGTGCCATATGCTTATGGTTTTGCAATTATAATGCTCACTGTTCTTGTAAAAGCTGCCACATTTCCGTTGACAAGAAAACAGGTAGAATCTGCCATGGCTATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAGAAACAGTATGCCGGGGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAATTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTGTTCTCTTAACAACACCAGTGTGGATCGGGCTATATCGAGCCTTTTCTAATGTGGCAGACGAGGGACTCCTCAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCGCGCCAAAATGGAAGTGCTATCTCCTGGCTTTTTCCTTTTGTGGATGGTCAGCCTCCCCTTGGATGGCCAGATACATTGGCTTACCTTGTCTTGCCTGTTTTGCTGGTTGTCTCTCAATACATTTCTCTCCAAATAATGCAGTCATCACAGGCTACTGATCCCAATGTGAAGAGTTCTCAAGTCTTAAACAAGGTCCTTCCATTAGTGATTGGTTATTTTGCTCTTTCAGTTCCTTCAGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAGTATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTTTGAGACAAGTTCTTGATGATAATGTGAAAAATGTAGACTTAATGCAGGTTCAAAAGTCAGTACCGAAACTAAATTCCACAAAAGTTGAAGAAGCTAGAAAAGATGAAAAATTGACATCAGAAGGGCCACGTCCTGGTGACAGATTTAAGCAATTAATGGAGGAACAGGCAAGGAAGAAACAACAGAGAGAAGAAGAAAAAAGGAAGGCTGAAGAAGCAGCAGCTAAAGCTAATAATCACGAGCAAACAATTGAAGGGGGAAATCAAGCTGTAGGAGACTTAGTTGAAAATTCCCAATCTCTGGCTACTGATACTGATCCATCCATATCTGGAGTAGTAAATGGTAGTCCATTGAGCAAGGACTTGGAGAGAAATCAGAATTCTACATCTGCATCTACATCTGATACTCAAAATGACGAAGGTTCTGCTCATTTCAATGCAGTAAACGAGAAAAATCTAGAAAAGGAACCAAGAGAAGTATTGACAACCAGAGCTACTACAAACAAGCAACCTCATGGAGAAGACTCAGATCGCGTGTCAAAGGATTGA 1608 0.4285 MAALLPCTPTILSAPFGNRSRTNHIPLRPHSHAFPGSTKRFLRGSLSVARFGFHPGFLPEPDEAEFVLRELFNRAEGFLYTIADAAVSSSDTVVTTTTKQNNDWFSGITNYMETILKVLKDGLSTLHVPYAYGFAIIMLTVLVKAATFPLTRKQVESAMAMRSLQPQVKAIQKQYAGDQERIQLETARLYKLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLSEGFFWIPSLSGPTTIAARQNGSAISWLFPFVDGQPPLGWPDTLAYLVLPVLLVVSQYISLQIMQSSQATDPNVKSSQVLNKVLPLVIGYFALSVPSGLSLYWFTNNILSTLQQVWLQKLGGAKNPLRQVLDDNVKNVDLMQVQKSVPKLNSTKVEEARKDEKLTSEGPRPGDRFKQLMEEQARKKQQREEEKRKAEEAAAKANNHEQTIEGGNQAVGDLVENSQSLATDTDPSISGVVNGSPLSKDLERNQNSTSASTSDTQNDEGSAHFNAVNEKNLEKEPREVLTTRATTNKQPHGEDSDRVSKD* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0858 535 PANTHER BNAA09G28180D PROTEIN 42 466 - -
Mal1g0858 535 Pfam 60Kd inner membrane protein 132 346 IPR001708 GO:0016021|GO:0032977
Mal1g0858 535 MobiDBLite consensus disorder prediction 454 498 - -
Mal1g0858 535 MobiDBLite consensus disorder prediction 454 535 - -
Mal1g0858 535 MobiDBLite consensus disorder prediction 379 431 - -
Mal1g0858 535 PANTHER OXA1 42 466 IPR001708 GO:0016021|GO:0032977
Mal1g0858 535 Coils Coil 402 436 - -
Mal1g0858 535 MobiDBLite consensus disorder prediction 378 440 - -
Mal1g0858 535 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 132 346 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0858 Mal-Chr1 10210492 10215989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0858 71 420 Chloroplast and Mitochondria Gene Families AT2G28800 53.258 2.67e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0858 K03217 - gmx:100802546 753.436