Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0838 ATGTATTTATCATCAGAAAAGCCTCGTCCAATCGATTTCTACAAAGAAGAAGCACGCGACATGATGATGGAAGTTGTAACCAACACCGATCTTCAACCACCACCACCACCTCCACCGCACCACCACCTTCAACAACCACCACCGCCGCAAATGATTCTCACCGCCGAGAGCAGCGGCGAGGATCCTGAAATGGAGATCAAAGCTCCGAAGAAACGCGCCGAAACCTGGGTGCAAGACGAAACACGAAGCCTCATTGGTTTACGACGCGAGATGGATTCGCTTTTCAATACTTCGAAGTCGAATAAGCATCTTTGGGAGCAGATTTCAGCGAAGATGAGAGAGAAGGGTTTTGATCGGTCACCGACTATGTGTACTGATAAGTGGAGGAATCTTTTGAAAGAGTTTAAGAAAGCGAAGCATCATGATAGAGGTGGAAGTGGTTCTGGGAAGATGAGTTGTTATAAAGAGATTGATGAGATCTTAAGAGAGAGAAGTATTGATGATGCCAACATTTCTTTTGGGCCTGTTGTTGAAGCTTCTGGAAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGACATCCTCTTGCCATTGCCGCAGCGGATGTTGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCGGGAAATGGTGGGGAAAGTCAGTCTTGTTGTGGAAGGGTTATATCAGTCAAATGGGGCGATTATACAAGACGAATAGGTATTGATGGCACTCCGGAAGCCATCAAGGAGGCAATCAGGGCCGCTTTTAGGTTGAGAACCAAACGTGCATTTTGGTTGGAGGATGAGGAGCAGATTATCAGAAGTATTGACCGTGACATGCCTATAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCCATCAAAGTATGCCTATATGATGAGTCTGACCATATCCCTGTGCATACTGAAGAGAAGATATTTTATACCGAGGATGATTACCGTGATTTTCTGGCACGCCGGGCTTGGACAAGTCTACGAGAATTTGATGGTTATAGAAATATTGACAATATGGATGACCTTCGGCCTGGTGCAATATACCGAGGTGTGAGTTGA 1092 0.456 MYLSSEKPRPIDFYKEEARDMMMEVVTNTDLQPPPPPPPHHHLQQPPPPQMILTAESSGEDPEMEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGGSGSGKMSCYKEIDEILRERSIDDANISFGPVVEASGRPTLNLERSLDHDGHPLAIAAADVAASGVPPWNWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRAFWLEDEEQIIRSIDRDMPIGNYTLHLDEGMAIKVCLYDESDHIPVHTEEKIFYTEDDYRDFLARRAWTSLREFDGYRNIDNMDDLRPGAIYRGVS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0838 363 CDD GT1 74 139 - -
Mal1g0838 363 Pfam Myb/SANT-like DNA-binding domain 75 160 IPR044822 -
Mal1g0838 363 ProSiteProfiles Myb-like domain profile. 68 132 IPR001005 -
Mal1g0838 363 MobiDBLite consensus disorder prediction 30 46 - -
Mal1g0838 363 Gene3D - 76 138 - -
Mal1g0838 363 SMART sant 72 134 IPR001005 -
Mal1g0838 363 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 6 165 - -
Mal1g0838 363 MobiDBLite consensus disorder prediction 27 62 - -
Mal1g0838 363 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 168 362 - -
Mal1g0838 363 PANTHER - 6 165 - -
Mal1g0838 363 PANTHER - 168 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0838 Mal-Chr1 10025719 10030281 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0838 21 362 Trihelix Transcription Factor Family AT3G25990 63.807 5.36e-166 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal1g0838 Myb_DNA-bind_4 6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0838 - - ccaj:109807736 613.224