Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0827 ATGAAAGAAGAAATCAAATCAGAATTCAAAAAAGCTGGGTTCGATCTCGACGAAGAAGAAGAGATCCTAAGCAAATGTCTCACCTTTTGCATCAACTACAGTCTTACCCCTTCCGATCTCGTCTCAAGCTGGGAAGTTTATTATCTTAACAGACAGCTGGATGAACCAACTGTACAAAATGCTGAAATGGAAGGATTTCTGTTGCATCTACAAAATAATGTGAAACAAGATATTATTAAGGAGGAAACTGGTTTGCATCTTTATTCCATCGGAGATGTAGAAATGATCTTAAATAATGACGATGATACAAAGGATGATACTCCCAGCACACCAACGAATAATCGTCAAGATGTTTATTCGCCTATACATGATACACCATCTTTGTACGGGAATGTTTTAGCATCCGGAAAGCCAGCAGATCTGGTGACACCTTTTTCAAAACGGACAGATAGGTTTGCGGTGAGGTTCAGCATCAACACCATACCTGATGTAGAAAATGGAAAACAAGAACTTAATCGCGAGAATGAAGAGAATGACGAGTACAATATTGTTTCAAAAATTGTTACCCGAAAAAGGTGTTCATTGGTGATTCATGGATCAGGGCCGAAACCAGGTTGCAGATTTATGTATGATAGAACTGAGGATAGGATTAATGCAATAGAAAACCGAATTAGAAAACATGCAAGAGCACTTGTAGCTTCTGGGCTCTATGTTGAACCAACAGACCCTACAATTGCCTCACCGAGAAGCTTTTTCGCGGTTGGTATGATTTGTTGCGACGGAGAAGGCCGTCTTAACGAGAAATCTGTCATGTTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGTGTCCGCCTAGACTTACAACGTTTAAGCCATTATTCAGTTTTCCCTGGCCAGAAGCAAGCTATTGATAAGGAGAATCAGCCAACTGATCTGCTTTGTAATCAGAGAGAGTTATCAATGATTATTGCGGCGGGCCCTTTTACCACAACCGACAATTTGTTTTTTGAGCCTCTTGTAGAACTGCTGGCATATGCAAAGCGAAGACCACCCCAGTTGCTTGTATTGCTTGGACCATTTATTGATTCTGAACACCCAGACATCAAGAAAGGAACTGTGGACAGGGCTTTTGATGAAATATTTCGTTTGGAAGTCTTGAGGAAGTTGGAAGATTATGTAGAAAGTATGGGTTCAGCGGTACGTGTTCTCCTTGTACCATCTATACGGGATGCTAACCATGATTTTGTTTTTCCTCAGCCTGCATTTGATATCAGTCTACCTCAGGTTCAGATCTCCAGTCTCACTAATCCTGGAATCTTTGAGGCAAATGAGGTCAAAGTTGGTTGCTGCACTTTGGATGTTCTCAAGCAGATCAGTGGGGAGGAGATATCACGAATTGCAGCAGATAGAAAACATATTGATCGCTTGAGTAGACTTGCAAACCATATTCTTAACCAACAAAGTTTCTATCCGCTTTACCCACCGGCAGAAAGTGTTCCCTTGGACTTTTCTCTGTCGCCAGAAGCCATTCAACTCTCATCGGTTCCAGATGTTCTTATCATACCTTCAGACATCAAGTACTTTGTCAAGGTTCTTAATAATGAAAGCGAAGAGACCAACCGCACGAAATGCATTGCTGTAAATCCGGGAAGATTAGCCAAAGGAGAAGGAGGGGGCACTTTTGTGGAGCTTGATTATAGTGGGGGTCCTGATAAAATTAGCGCTTCAATTTTGGCCATATGA 1746 0.4164 MKEEIKSEFKKAGFDLDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLDEPTVQNAEMEGFLLHLQNNVKQDIIKEETGLHLYSIGDVEMILNNDDDTKDDTPSTPTNNRQDVYSPIHDTPSLYGNVLASGKPADLVTPFSKRTDRFAVRFSINTIPDVENGKQELNRENEENDEYNIVSKIVTRKRCSLVIHGSGPKPGCRFMYDRTEDRINAIENRIRKHARALVASGLYVEPTDPTIASPRSFFAVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHYSVFPGQKQAIDKENQPTDLLCNQRELSMIIAAGPFTTTDNLFFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTVDRAFDEIFRLEVLRKLEDYVESMGSAVRVLLVPSIRDANHDFVFPQPAFDISLPQVQISSLTNPGIFEANEVKVGCCTLDVLKQISGEEISRIAADRKHIDRLSRLANHILNQQSFYPLYPPAESVPLDFSLSPEAIQLSSVPDVLIIPSDIKYFVKVLNNESEETNRTKCIAVNPGRLAKGEGGGTFVELDYSGGPDKISASILAI* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0827 581 Coils Coil 210 230 - -
Mal1g0827 581 Coils Coil 164 184 - -
Mal1g0827 581 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 569 IPR016722 -
Mal1g0827 581 Pfam DNA polymerase alpha/epsilon subunit B 323 531 IPR007185 GO:0003677|GO:0006260
Mal1g0827 581 Gene3D - 1 68 IPR043034 -
Mal1g0827 581 MobiDBLite consensus disorder prediction 99 121 - -
Mal1g0827 581 Gene3D - 302 466 - -
Mal1g0827 581 Gene3D - 474 577 - -
Mal1g0827 581 PIRSF DNA_pol_alpha_2 1 304 IPR016722 -
Mal1g0827 581 PIRSF DNA_pol_alpha_2 300 571 IPR016722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0827 Mal-Chr1 9938788 9946129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0827 3 581 Core DNA Replication Machinery Family AT1G67630 55.769 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0827 K02321 - gmx:100795306 873.233