Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0814 ATGTTTCCTTTACAACGATGCAATGAACTGGCGAAACCCTTATCAAATTGTCCCAACCACCACCCACAAAATCACAAAATCTCCGAAGATCTGATTCTTGATGATTATGATTCTCTTGTTGTTGATTTTTCTCATAAAAAATTCGTTACTAGCCGGCCACCAAACAAATTATTTTATACAGATCATAGTACAAATCATGGTAGTAATCATAATTCTATTCAGGATAAGAAGAAAATGGTTCATAGGGAGATTGAGAAGCTAAGGAGACAAGAAATGGCTACACTTCATGCTTCTCTTAGATCCCTTCTCCCTCTTCACTTCATCAAGGGAAAACATTCTTTATCTGATCAAATGAATGAGGCAGTGAATTACATAAATCACTTGAAAATGAATATGAAAGAGCTAAGTAACAAGAAGGATGAACTGAAAAAACTCTCTAATCCCAGCCTTAAAAGCCATGCATCTTGTAATTTCAGTATCCACAAGATCAATAATGGAACTGTGGGAGTTATCGATTCTGAGAGTGTAGATCTATCTGAGCTAAGAAGGAATTTTTCCAATATGAATCCATGGTTTAGTTGTTCAGATTAA 591 0.3519 MFPLQRCNELAKPLSNCPNHHPQNHKISEDLILDDYDSLVVDFSHKKFVTSRPPNKLFYTDHSTNHGSNHNSIQDKKKMVHREIEKLRRQEMATLHASLRSLLPLHFIKGKHSLSDQMNEAVNYINHLKMNMKELSNKKDELKKLSNPSLKSHASCNFSIHKINNGTVGVIDSESVDLSELRRNFSNMNPWFSCSD* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0814 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 128 IPR011598 GO:0046983
Mal1g0814 196 Gene3D - 67 156 IPR036638 GO:0046983
Mal1g0814 196 Pfam Helix-loop-helix DNA-binding domain 77 129 IPR011598 GO:0046983
Mal1g0814 196 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 170 194 IPR015660 GO:0003700|GO:0006357
Mal1g0814 196 Coils Coil 70 90 - -
Mal1g0814 196 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 170 194 - -
Mal1g0814 196 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 170 - -
Mal1g0814 196 Coils Coil 118 145 - -
Mal1g0814 196 CDD bHLH_AtORG2_like 77 153 - -
Mal1g0814 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 150 IPR036638 GO:0046983
Mal1g0814 196 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 170 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0814 Mal-Chr1 9773566 9774607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0814 67 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 58.696 9.48e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g0814 HLH 4.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0814 - - gmx:100780888 194.512