Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0808 ATGTCTGCTGAATCTGATTCTAAACGCAACAAGGACAAAACTAAAAACACCAAAAAATCCCAATCACAAACCGAACCAGAAGATTCCATCACTGACAAGAAAAAAACCTCCAAACTTGTTAACGAAGATGTGGTTTCGGGGAAGACGAAGAAGGACAAAAAGAAGCGTAAGGCTTCAGAGTTAGAGACAATGACGACGACCAATGGCGACAATAATGTGAATAGTTTAGAGTTGGTTGAGTCTAAAGGTTCAAGAGAGGATAAAGAAAAGAAGAATAAGAAGAAGAAGAAAGCAAAGTGTGAAGAAGAATCTGTAGTAATGGAAAAGAAGGTGGAGGATCCTAATGCTGTTTCTAAATTTAAGATATCTGAGCCGTTGAGGTTAAAGTTGAAGGAAAAGGGAATTGAGTCCTTGTTTCCAATTCAGGCTATGACTTTTGATATTATTATGAATGGTTCTGATTTGGTTGGTAGAGCTCGCACTGGTCAGGGTAAAACTCTTGCCTTTGTATTGCCCATATTAGAATCTGTAACAAATGCCAAAGCAAAAGAAACAAATGGGAATGCAAAAGAATCAAGGAAGACTGGCTATGGGAGGCCTCCAAAACCAAGTGTTCTCGTGCTTTTACCTACTAGGGAGTTGGCCTGTCAGGTGAATGCTGATTTTGAAGTTTATGGTGGGGCAATGGGATTGACTTCTTGTTGTTTATATGGAGGAGCTCCATATAAAGCTCAAGAAATTAAGCTTCAGAGAGGTGTCGATATTGTTATTGGCACACCGGGCCGCATAAAGGATCATATAGTGAGGGGAAATATTGACCTGAGCCAATTAAAGTTTCGTGTCCTCGATGAAGCAGATGAGATGCTGAGGATGGGTTTTGTTGAAGATGTTGAACTGATTCTTGGTAAGGTAAAAAATGTTGATCAAGTTCAGACACTTCTATTCAGTGCTACTTTGCCAGAATGGGTTAAGAATATTGCTAAAAGATTTCTTAAAGAAGATAAGCAAACTGCTGACCTTGTTGGAAATACAAAAATGAAGGCTAGTACCAGTGTTAGGCATTATATTCTTCCTTGTACTGGTTCTGCTAGGTCCCAGCTTATCCCAGACATTATTCGATGTTACAGCAGTGAAGGTCGAACAATTATATTCACTGAGACAAAGGAATCAGCATCACAGCTTGCAGAGTTGTTGCCAGGAGCAAGAGCTCTCCATGGTGACATACAGCAAGCACAACGCGAGGTTACTTTGTCTGGCTTCAGGTCCGGGAAATTCATGACATTAGTTGCCACAAATGTGGCAGCGCGGGGTCTTGATATTAACGACGTTCAGTTAATTATTCAGTGTGAACCTCCAAGGGATGTAGAAGCCTATATCCATCGTTCTGGGCGCACAGGAAGAGCAGGTAACACTGGAGTTGCTGTTATGCTTTATGATCCAAGGAGGTCAAATATATCTAAAATAGAGAGAGAGTCAGGTGTTAAATTTGAACATATATCTGCCCCTAAGGCCAATGATATTGCCAAAGCTGTTGGTGGAGAAGCTGCAGAAATGATTATGCAAGTGTCTGATAGCGTGATTCCTGCATTCAAGTCTGCTGCTGAGGAGCTTTTAAATAACTCTGGTTTATCAGTTGTTGATTTATTTGCCAAAGCTCTTGCCAAGGCTGTTGGTTATACTGAGATCAAGAAAAGATCTCTTCTCACTTCTATGGAGAACTATGTTACATTACTTCTTGAGACTGGGAAACCTATCTTCACCCCAACTTTTGCATACAGAATCTTGAGGAGGTTTTTGCCTGAAGAGAAGGTTGAGGCCGTAAAAGGTCTTACTATAACTGCAGATGAAAATGGTGTTGTTTTTGATGTAGCAGCTGAAGATTTAGATACATATCTTACTGGTAAGGAAAGTGTATCAGACGTAAGATTAGAGGTGTTAAAAGAATTGCCGCGTCTGCAACAGAGAGATCAATCAAGAGGGGGTAGATTTGGTGATGGTAGTGGTCGCGGTGGGGGTAGTAGGTTTTCAGGTGGTGGCAGGAATGGTAGATTTTCAAGTGATAGGTTTTCCAACGGTGGCGGTAGAGGTCGTGGAAACTGGGGCGGGAATAAATGGTGA 2118 0.4122 MSAESDSKRNKDKTKNTKKSQSQTEPEDSITDKKKTSKLVNEDVVSGKTKKDKKKRKASELETMTTTNGDNNVNSLELVESKGSREDKEKKNKKKKKAKCEEESVVMEKKVEDPNAVSKFKISEPLRLKLKEKGIESLFPIQAMTFDIIMNGSDLVGRARTGQGKTLAFVLPILESVTNAKAKETNGNAKESRKTGYGRPPKPSVLVLLPTRELACQVNADFEVYGGAMGLTSCCLYGGAPYKAQEIKLQRGVDIVIGTPGRIKDHIVRGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVDQVQTLLFSATLPEWVKNIAKRFLKEDKQTADLVGNTKMKASTSVRHYILPCTGSARSQLIPDIIRCYSSEGRTIIFTETKESASQLAELLPGARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNISKIERESGVKFEHISAPKANDIAKAVGGEAAEMIMQVSDSVIPAFKSAAEELLNNSGLSVVDLFAKALAKAVGYTEIKKRSLLTSMENYVTLLLETGKPIFTPTFAYRILRRFLPEEKVEAVKGLTITADENGVVFDVAAEDLDTYLTGKESVSDVRLEVLKELPRLQQRDQSRGGRFGDGSGRGGGSRFSGGGRNGRFSSDRFSNGGGRGRGNWGGNKW* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0808 705 MobiDBLite consensus disorder prediction 62 79 - -
Mal1g0808 705 Gene3D - 350 576 IPR027417 -
Mal1g0808 705 SMART ultradead3 134 355 IPR014001 -
Mal1g0808 705 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 146 337 IPR014001 -
Mal1g0808 705 CDD SF2_C_DEAD 352 478 - -
Mal1g0808 705 SMART helicmild6 392 469 IPR001650 -
Mal1g0808 705 Pfam GUCT (NUC152) domain 558 653 IPR012562 GO:0003723|GO:0004386|GO:0005524
Mal1g0808 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 481 IPR027417 -
Mal1g0808 705 MobiDBLite consensus disorder prediction 654 705 - -
Mal1g0808 705 Gene3D - 65 337 IPR027417 -
Mal1g0808 705 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 42 681 - -
Mal1g0808 705 MobiDBLite consensus disorder prediction 1 100 - -
Mal1g0808 705 CDD DEADc 130 333 - -
Mal1g0808 705 SUPERFAMILY RNA-binding domain, RBD 562 644 IPR035979 GO:0003676
Mal1g0808 705 Gene3D - 577 648 - -
Mal1g0808 705 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 367 526 IPR001650 -
Mal1g0808 705 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 7 42 681 - -
Mal1g0808 705 CDD GUCT_RH7_like 565 650 - -
Mal1g0808 705 Pfam DEAD/DEAH box helicase 139 325 IPR011545 GO:0003676|GO:0005524
Mal1g0808 705 Pfam Helicase conserved C-terminal domain 372 469 IPR001650 -
Mal1g0808 705 MobiDBLite consensus disorder prediction 1 61 - -
Mal1g0808 705 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 281 289 IPR000629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0808 Mal-Chr1 9684014 9688126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0808 111 526 Eukaryotic Initiation Factors Gene Family AT3G19760 27.619 4.27e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0808 K16911 - gmx:100820207 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0808 1 9684014 9688126 Mal1g0808 1 9684014 9688126 ECH