Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0801 ATGGCCTCTAAAATGGAAAGCGAGAGTCCAACAGATACCCCACCATCACCGCCAAAGAATATATACAAGGATCCAGATGATGGGCGGCAACGGTTTTTGCTTGAACTGGAATTTGTTCAATGCCTTGCAAATCCTACCTACATCCACTATTTGGCTCAGAACCGATATTTTGAGGATGAAGCATTCATTGGGTACTTAAAGTATCTTCAATATTGGCAACACCCTGAATATATTAAATTTATTATGTATCCTCACTGCCTCTATTTTCTGGAGCTTCTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCTACCAATAAGGAATTGACACATAGACAGCAGTTTTACTTCTGGAAGAACTATAGAAATAATCGGCTAAAACACATTTTACCAAGATCACTTCCAGAACCTACTGCTGCACTTCCTGCTCCTGCTTCAACTCAACCCCAGCCGACTGTGCCTGCACTACCACTAGCACCTGCTACAAGCGTTGCTGTGACAACATCTTCTACTCAAGTTCCTTCTCCAATGCCATATGGTGTACTCCCTGGCTCCGGTCTTGTGAAAAATGACATGAGGAATACTTCAGGTGATAAAAGGAAAAGAAAGTGA 615 0.4211 MASKMESESPTDTPPSPPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQHPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELTHRQQFYFWKNYRNNRLKHILPRSLPEPTAALPAPASTQPQPTVPALPLAPATSVAVTTSSTQVPSPMPYGVLPGSGLVKNDMRNTSGDKRKRK* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0801 204 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 9 204 - -
Mal1g0801 204 MobiDBLite consensus disorder prediction 143 157 - -
Mal1g0801 204 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 18 119 IPR038089 -
Mal1g0801 204 MobiDBLite consensus disorder prediction 168 204 - -
Mal1g0801 204 MobiDBLite consensus disorder prediction 138 157 - -
Mal1g0801 204 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Mal1g0801 204 MobiDBLite consensus disorder prediction 1 23 - -
Mal1g0801 204 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 9 204 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0801 Mal-Chr1 9579066 9582383 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Mal1g0801 Med31 2.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0801 K15153 - gmx:100527879 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0801 1 9579066 9582383 Mal1g0801 1 9579066 9582383 ECH