Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0793 ATGCCAGTGAGGCAAATGAAAGAAAGCTCAGAGCAACACATTGTGATCAAAACCAATTTGCAGAATCCTAAGAATACACCAAATGCTTCTTCTCAAAATGGAAAAGCTCCACCACCAACTTCATTACAAAACAATAACCAAACTTCACCTCAACCAAGGAACAAAGGAAGAAGAAGGGGAAGAGGTGGTAGAAAATCTGATCAAGGAGAAGTTTTGATGAGACCCAGTTCAAGACCATGTACTGCAATAACAACTACTATTAATGGAAATGTTGAAAATGGCTACAACTCTGGTGGCATTGATGTTGGTTTTCCTACTTCAAGCAAGTCTATGAACTTTGCTCGTAGACCTGGATTTGGACAAGTTGGGACAAAATGTATTGTGAAGGCTAATCACTTCTTTGCAGAGTTACCAGACAAGGACTTAAACCAATATGATGTTACTATTACCCCTGAAGTGTCTTCAAGAACAGTAAACAGGTCAATTATAGCTGAGCTTGTGAGGTTGTATAAAGAGTCTGATTTAGGGATGAGGCTTCCAGCTTATGATGGCAGAAAAAGTCTGTATACTGCAGGACAGCTACCCTTTTCCTGGAAAGATTTTAAGATTAAGCTTGTAGATGAAGAGGATGCAGTTAATTGCCCCAAAAGGGTAAAAGAGTACAGGGTGGTGATCAAGTTTGTGGCCAGAGCAAACTTGCATCATTTAGGCCAGTTTCTAGGTGGTAAGCGTGCTGATGCGCCGCAAGAGGCACTTCAAATTCTTGATATTGTACTACGAGAGCTATCAACTAAGAGGTATTGCCCCATTGGGAGGTCTTTCTTTTCACCTGATATAAGACGACCACAACGGCTTGGAGAGGGATTGGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATAGATATGGCATCTGCTGCGTTCATAGAGCCTCTTCCAGTTGTAGAATTTGTTGGGCAGCTATTAGGGAAAGATGTGTTGTCAAGACCATTGTCGGATGCTGATCGCATTAAGATTAAGAAAGGCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTAAGAAGAAAATACCGTGTTTCAGGGTTGACTTCTCAACCAACAAGGGAACTTGTGTTTCCCGTTGATGAGAATTCAACTATGAAATCAGTAGTCGAATACTTTCAAGAGATGTATGGTTTCACTATTCAATACACACACCTTCCTTGCCTACAAGTAGGCAACCAAAAGAAGGCTAACTACTTACCTATGGAGGCGTGCAAAATTGTCGAAGGGCAACGCTATACAAAAAAATTGAATGAGAAGCAAATTACTTCTCTATTGAAAGTTACTTGTCAGAGACCTCGCGATCGGGAAAATGACATTTTACAGACTGTTCAACATAATGCTTATGACCAAGATCCTTATGCAAAGGAATTTGGAATTAATATCAGTGACAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCCGCCCCTTGGCTTAAATATCACGAAAGTGGGAAAGAAAAGAACTGTTTACCCCATGTTGGCCAGTGGAACATGATGAATAAGAAAATGATTAATGGAATGACTGTTAACCGGTGGGCATGTATAAATTTCTCACGGAGCGTGCAAGATAGTGTTGCTCGCACTTTTTGTAACGACCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCTGGAGCCTGTTATTCCTATCTACAATGCCAAGCCTGAGCAGGTGGAGAAAGCTTTGAAGCATGTCTACCATGTGTCAACAAACAAAACTAAAGGAAAGGAGTTGGAGCTTTTGTTAGCAATTTTACCAGACAGTAATGGTTCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGTATAATCTCACAATGCTGCCTTACAAAGCATGTCTTCAAAATCACTAAACAGTATTTGGCTAACGTGTCTCTGAAGATCAATGTTAAGATGGGAGGGAGAAACACTGTTCTTCTTGACGCTGCAAGCTACAGAATACCATTAGTCAGCGACATACCAACTATAATTTTTGGAGCAGATGTTACACACCCTGAAAATGGAGAAGACTCTAGCCCCTCAATAGCAGCTGTTGTAGCCTCCCAAGATTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGGCAGGAACTTATACAAGATTTATACAAAACATGGCATGATCCTGTTCGCGGCACAGTTAGTGGTGGCATGATAAGAGATTTACTGATTTCCTTTAGAAAGGCCACGGGACAAAAGCCGCTACGAATTATATTTTACAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTATTGCTTTATGAGTTGGATGCAATCCGGAAGGCATGCGCTTCCTTAGAACCAAATTATCAGCCTCCAGTAACTTTCATAGTTGTACAAAAACGACATCATACTCGGTTATTCCCAAACAACCACAGGGACAGGAGCAGTACTGATAAGAGTGGGAATATATTGCCTGGGACTGTTGTTGATACTAAAATTTGCCATCCGACAGAATTTGACTTCTATCTTTGCAGTCATGCTGGCATCCAGGGTACTAGTCGGCCAGCTCATTATCATGTTCTATGGGATGAAAACAATTTCACAGCAGATGGAATTCAATCTTTAACAAACAATCTATGTTATACATATGCTAGGTGCACTCGATCCGTATCCATTGTTCCTCCGGCATACTATGCACATTTAGCAGCCTTTCGAGCCCGTTTCTATATGGAACCAGAGATGCAAGAGAATGGATCGTCAGGTGATGGTAACTCTAGTCATAGCTCCAAGGGAACAACAACAAGAGCAGCTGGAGAATGTGGTGTTAAGCCATTACCAGCTTTGAAAGATAATGTGAAGAGAGTGATGTTTTACTGTTAA 2937 0.412 MPVRQMKESSEQHIVIKTNLQNPKNTPNASSQNGKAPPPTSLQNNNQTSPQPRNKGRRRGRGGRKSDQGEVLMRPSSRPCTAITTTINGNVENGYNSGGIDVGFPTSSKSMNFARRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFSWKDFKIKLVDEEDAVNCPKRVKEYRVVIKFVARANLHHLGQFLGGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRRPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRIKIKKGLRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKKLNEKQITSLLKVTCQRPRDRENDILQTVQHNAYDQDPYAKEFGINISDKLASVEARILPAPWLKYHESGKEKNCLPHVGQWNMMNKKMINGMTVNRWACINFSRSVQDSVARTFCNDLAQMCQVSGMEFNLEPVIPIYNAKPEQVEKALKHVYHVSTNKTKGKELELLLAILPDSNGSLYGDLKRICETDLGIISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAASYRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFPNNHRDRSSTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPEMQENGSSGDGNSSHSSKGTTTRAAGECGVKPLPALKDNVKRVMFYC* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0793 978 Gene3D - 499 672 - -
Mal1g0793 978 MobiDBLite consensus disorder prediction 936 954 - -
Mal1g0793 978 Pfam Argonaute linker 2 domain 461 507 IPR032472 -
Mal1g0793 978 SUPERFAMILY PAZ domain 315 475 IPR036085 GO:0005515
Mal1g0793 978 CDD PAZ_argonaute_like 320 434 - -
Mal1g0793 978 ProSiteProfiles Piwi domain profile. 609 930 IPR003165 GO:0003676
Mal1g0793 978 SMART Piwi_a_2 609 930 IPR003165 GO:0003676
Mal1g0793 978 MobiDBLite consensus disorder prediction 933 956 - -
Mal1g0793 978 PANTHER PROTEIN ARGONAUTE 10 54 977 - -
Mal1g0793 978 Gene3D paz domain 314 439 - -
Mal1g0793 978 SUPERFAMILY Ribonuclease H-like 601 930 IPR012337 -
Mal1g0793 978 MobiDBLite consensus disorder prediction 12 53 - -
Mal1g0793 978 MobiDBLite consensus disorder prediction 1 82 - -
Mal1g0793 978 Pfam Argonaute linker 1 domain 269 318 IPR014811 -
Mal1g0793 978 Pfam N-terminal domain of argonaute 125 259 IPR032474 -
Mal1g0793 978 CDD Piwi_ago-like 479 929 IPR045246 -
Mal1g0793 978 Pfam Mid domain of argonaute 518 595 IPR032473 -
Mal1g0793 978 Gene3D - 678 978 IPR036397 GO:0003676
Mal1g0793 978 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 54 977 - -
Mal1g0793 978 SMART PAZ_2_a_3 325 457 IPR003100 GO:0005515
Mal1g0793 978 Pfam PAZ domain 347 451 IPR003100 GO:0005515
Mal1g0793 978 ProSiteProfiles PAZ domain profile. 321 435 IPR003100 GO:0005515
Mal1g0793 978 SMART DUF1785_2 268 320 IPR014811 -
Mal1g0793 978 Pfam Piwi domain 610 929 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0793 Mal-Chr1 9478536 9484389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0793 1 978 Eukaryotic Initiation Factors Gene Family AT5G43810 80.200 0.0 1644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0793 K11593 - gmx:100816999 1781.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0328 6 4456288 4458606 Mal1g0793 1 9478536 9484389 PCT