Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0790 ATGAAAGGCGAGAGCGAATGCTTCGAGTGTCTCCAACTAAGAATCAACTCAGATTTCTCCGATCAACTCGTTTTCAATTATGCAATTTCCAATTCTCCTTTCCCTTTCGGATCCTCTGCTATTCTCAATATTACTGGTTCAGCAGATGGTGAAGCTTCAAGTGGTCAATTCATATTGCAGTACATGTCTAATCATCATAACAATTGTTTTACCAATTATGTAAATGAATATATTTTGGATAGTAGTGAAAACACGAAGAGTGATGATCCTGATGTTAGTGATGGCCAATATAATGATGTAGTTAATGGTGGAAATGGATTTACCTTATCTGATGAGTCTGAAACTGGTAAAGCTCCGTTTAGGAATACGACTTGTAATCATTCTGGAAGGTTTTCTTGCTTGAGGACAATTGATGCGCTTGCACCGATTGCTTGTGTCGGAAAGTCTTCATATTCTGTACTTCAAGAGGTTGCCAATGATTTCTTGTCCAGGTTAACTGAAAATCATGTGTTGGACTCACTTGATCTCTTCAATGAAGGGAAAGCATCTGGGCGGGACAGTACGAATTTCCTTAGTTTAATTGGGTTTCCGTCATTTGAAGAAAATAATTTTCCAGGCTCTTTGAGGCATCCAAACATAGCTCCTGTACTTGCAATTTTAAAAACATCTGATGACACTAACATGGTGCTTCCGAAGACTCAATACAACTTGGAAAGTATTCTTCATTTTAACCCCAATGCCTTAAAGTCTGATTGGAATAGAAGATTTCTTATATATCAGCTACTATCTGCCTTATTGTACTTGCATGGTTTAGGGGTTTCCCATGGTAATATATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTTAGATTATGGAATGAACCTGTATTGGAATCTAATTTAACTTTGCAAGAGAGTGAAAGTGTAAAATCCAAACCTGCAAAAATTGGTTGTTGTAATGGTGGTTGTCATTCTAATGATCTTTATGCTGATCTAAAGCTTTCTCCATTAATTGATTGGCATTCTAGCTTTCATCAGTGGTGGAAAGGAGAACTAAGTAATTTTGAGTATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTTGTTGATTTTAGCTCAAAACCGGATGATAATTGTGATGTAGGGTGGCGAGATTTAAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAGTTGGATTTCACCTATTCAACGTCTGAAATCCCTCATCATGTATCAGATGAATGTTTGTCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGGTTGCCTCTGAGTGTTCTTCGAATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCTCAATGCAGAGGCTCTATCAATGGACACCCGATGAATGCATTCCAGAGTTTTATTGTGATGCCCAAATTTTTAGGTCGGTACATGATGGTATGGCTGATTTGGCTATACCTTCTTGGGCAGAGAGCCCTGAGGATTTCATTAAATTGCATCGTGATGCGTTGGAAAGTAATAGGGTGTCATTTCAACTACATCACTGGATAGATATAATCTTTGGGTACAAAATGTCTGGCCAGGCCGCAATTGTTGCTAAGAATGTTATGCTTACTCAATCAGAATCCACAATGCCAAGATCAACAGGACGTCGTCAGCTCTTTATGCGGCCACACCCTATTCGCCACGCCACTGCCAAAATAACACGTAATGGGTCAAATAAATATGCAAAAGTTTTGACCCAAACAAATGAAATGCAGCGAGAGACATCTCTTCTATCTGAAACTGCGTATCTACAAGAATTGGAACAAGCATCTGCATTTTCGGAACATGCTAGGAATTTGAATGCTTGTTACCGTTACCCATTAGGTCAAATGAAAAGGAAGAACATCTCATCTCTGGGAGATCCAACCGCAGGGACATTCACTAAAAATATAAGCGATGTATCTTTAATTGACAAAAATTATCGGTTGCCATATAAAATGAACCATATATCTTTTCTTCAACATATGAAAGAGGAAGATGAAGGCTTTTCAGGATATCCAGACTTGCTTCTCTGGAGGCAGAAATTGTCTTCTTCAAGACTTGCCTCTGAAGATATTGCAAGGGACATATTTTCTGTCGGTTGTCTCTTGGCAGAACTTCATCTTTGCAGACCGCTCTTTGACTCAATCTCATTGGAAATATACTTGGAGGATGGAACATTACCAGGATTTCTGCAGGAACTACCTCCTCATGTTAGGATACTTGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCGGCCAAAATTCTTCTGGATTCACCTTATTTTCCGAAAACAATCAAGTCTTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTTGCTAAAGATGAATCTCGTCTTCGTTTTGCTGCAAATCTTGCAAAGCAGGGAGCTCTCAGGCAAATGGGTACATTTGCAACTGAAATGTGTGCTACTTATTGCTTACCACTTATAGTGAATGTTGCGAGTGATACTGAAGCTGAATGGGCATACATACTCCTGAAAGAATTGATGAAATGCTTAACCGCACAAACAGTGAAAATATTAATATTGCCAACCATACAGAAAATTTTACAGAACACAGGTTATTTACATTTGAAGGTTTCCCTTTTACAAGATTCATTTGTACGCGAAATATGGAACCGAGTTGGTAAACAAGCATACCTGGAATCTATTCACCCGTTGGTCTTATCAAACTTGTATATTTCTCCGGATAAAAATTCAGCTGCATCTGCTTCAGTGCTACTAATTGGTTCTAGTGAGGAGATTGGTGTACCAATTACCATAAATCAGACTATTTTGCCCCTTGTTCACTGCTTTGGGAAAGGACTGTGTGTAGATGGCATTGATGTGCTGGTCAGAATTGGGGGTATTTTTGGGGAATCCTTTATTGTTAAACAGATGCTACCATTACTGAAAAATGTTGTCCGATCGTTCATCGACGTGTCATTCATGAATAAGCCTGATCCTGTCCAGAGTTGGAGTTCTTTAGCACTTATTGATTGTATGATGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAAGTCATTGTAAAGGAGCTGCTTGAAGACATAAGTTGCATACACGTTGGGGTTCTTATGCAGAAACATATGGAAATTACTGTGCTTCAGGTTGCTGCTACTACTCTCTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACGGCATTGCATATTCTTCCAAAACTTAAAGAACTGTTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCGACTGCTGTCGGCAGAAACTTGAAGGTTACCAAATTAAAAATTGGAGGGGACTTCCAAATTGAGAGTCGCATGGATCTAGTGTTGCTTCTCTATACCTTGTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAACAACTTCTACGCCGTCATAACTGGAAGTGGGAATATGCAGGAGAATCATCAAGAAATAGCTCAGAAAGTAACATTGCTAGAAGACCTGCAATTACCCAGGGACTCACATCTGAATACAATCCAGCAAAGTTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAGGGAAGTAGAGCTGCCAAAAATTTGATTCAGAGAAAACCATTTAAAGTTCATCAAAGCCCAGTAGTAATGCAAGAAGGAATGTCAAACCAAGTGAACCATGAACCATGGTTTTGGTTTCCTAGTCCAGCCACCACCTGGGATGGGCCTGCATTTCTTGGGCGGGTGGGGATCCAAAAAGATGATCTTCCATGGAAAATCAAAGCATCTGTAATCTACTCTATGCGTGCACATCATGGAGCAGTGAGGTCTCTGGCCGTTCATCAGGATGAATGTACCGTTTATACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTATGAAGTGGGAATTGAGCCGAACTAACTGTCTGTCCGGCTATTATGGTCATGAGGAGGTTGTAAACGATATTTGTATTTTATCATCTAGTGGAAGAGTGGCATCTTGTGACGGAACTATTCATATTTGGGATAGTCAAACAGGGAAGCAAATATCAGTATTTGCCGAGTCCGAAACAGAATCTGGCCATCCTACGAACCATTCAGCATCTGTGCCAAAAATTACCAGTGACCAGGCAAATGTCCTTAATTTGAATACTCTATCAAATGGAATGCTGTCTAGTGCTTTTGATTCAAGCCTTTATACTTGTATGCATCTGTTAGACTCTGCTGAAACTCTTGTAGTTGGCACTGGAAATGGTTCTCTAAGGTTCATCGACGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGGGGGGAATCTAATGAATCTAGTTTTCATTCACTTATTTCTGCTGTATGTTCCTCTGGTTCTAACAAAGCGCAAGCAGGTGGAATTTCCACCTCACCATCCTTAATTGCAACAGGACAAAGTTCTGGTCACTGTAAATTATTTGATGCAAAGAGTGGTAATGTTGTTGCTTCTTGGCGTGCTCATGATGGATATGTAACAAAGTTGGCATCACCTGAGGAACATCTGCTCATTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTGAGAATGAATTTACCATCACAGCCCATTATTTTCAGAGGCCACTCAGATGGCATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGGCTTCTTTCCTTGTCTAAATCTGCCATTGAAATGGATGGGCAGCATCACATTATCCCCCAGAAACTCTATGTTTCTTCTGATAACGGAATGAGAAGCTTGTCAGCATTATCAAGTATTAGTATACTACCTTTCTCTCGATTGTTTCTTATTGGAACAGAAGATGGTTATTTGAGAATTTGTTGTTAA 4983 0.4012 MKGESECFECLQLRINSDFSDQLVFNYAISNSPFPFGSSAILNITGSADGEASSGQFILQYMSNHHNNCFTNYVNEYILDSSENTKSDDPDVSDGQYNDVVNGGNGFTLSDESETGKAPFRNTTCNHSGRFSCLRTIDALAPIACVGKSSYSVLQEVANDFLSRLTENHVLDSLDLFNEGKASGRDSTNFLSLIGFPSFEENNFPGSLRHPNIAPVLAILKTSDDTNMVLPKTQYNLESILHFNPNALKSDWNRRFLIYQLLSALLYLHGLGVSHGNICPSNIMLTDSLWSWLRLWNEPVLESNLTLQESESVKSKPAKIGCCNGGCHSNDLYADLKLSPLIDWHSSFHQWWKGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVVDFSSKPDDNCDVGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSSMQRLYQWTPDECIPEFYCDAQIFRSVHDGMADLAIPSWAESPEDFIKLHRDALESNRVSFQLHHWIDIIFGYKMSGQAAIVAKNVMLTQSESTMPRSTGRRQLFMRPHPIRHATAKITRNGSNKYAKVLTQTNEMQRETSLLSETAYLQELEQASAFSEHARNLNACYRYPLGQMKRKNISSLGDPTAGTFTKNISDVSLIDKNYRLPYKMNHISFLQHMKEEDEGFSGYPDLLLWRQKLSSSRLASEDIARDIFSVGCLLAELHLCRPLFDSISLEIYLEDGTLPGFLQELPPHVRILVEACIQKDWMRRPSAKILLDSPYFPKTIKSSYLFLAPLQLVAKDESRLRFAANLAKQGALRQMGTFATEMCATYCLPLIVNVASDTEAEWAYILLKELMKCLTAQTVKILILPTIQKILQNTGYLHLKVSLLQDSFVREIWNRVGKQAYLESIHPLVLSNLYISPDKNSAASASVLLIGSSEEIGVPITINQTILPLVHCFGKGLCVDGIDVLVRIGGIFGESFIVKQMLPLLKNVVRSFIDVSFMNKPDPVQSWSSLALIDCMMTLDGLVAFLTEEVIVKELLEDISCIHVGVLMQKHMEITVLQVAATTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTAVGRNLKVTKLKIGGDFQIESRMDLVLLLYTLFASLLGIEKLRQCCATWLLLEQQLLRRHNWKWEYAGESSRNSSESNIARRPAITQGLTSEYNPAKLLLNGVGWSIPQSQGSRAAKNLIQRKPFKVHQSPVVMQEGMSNQVNHEPWFWFPSPATTWDGPAFLGRVGIQKDDLPWKIKASVIYSMRAHHGAVRSLAVHQDECTVYTAGIGQGYKGTVMKWELSRTNCLSGYYGHEEVVNDICILSSSGRVASCDGTIHIWDSQTGKQISVFAESETESGHPTNHSASVPKITSDQANVLNLNTLSNGMLSSAFDSSLYTCMHLLDSAETLVVGTGNGSLRFIDVARGQKLHIWRGESNESSFHSLISAVCSSGSNKAQAGGISTSPSLIATGQSSGHCKLFDAKSGNVVASWRAHDGYVTKLASPEEHLLISSSLDRTLRVWDLRMNLPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSAIEMDGQHHIIPQKLYVSSDNGMRSLSALSSISILPFSRLFLIGTEDGYLRICC* 1661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0790 1660 Gene3D Transferase(Phosphotransferase) domain 1 707 800 - -
Mal1g0790 1660 Pfam Beige/BEACH domain 350 560 IPR000409 -
Mal1g0790 1660 ProSitePatterns Trp-Asp (WD) repeats signature. 1548 1562 IPR019775 -
Mal1g0790 1660 SMART Beach_2 348 580 IPR000409 -
Mal1g0790 1660 Gene3D - 1491 1660 IPR015943 GO:0005515
Mal1g0790 1660 SMART WD40_4 1464 1520 IPR001680 GO:0005515
Mal1g0790 1660 SMART WD40_4 1523 1561 IPR001680 GO:0005515
Mal1g0790 1660 SMART WD40_4 1625 1660 IPR001680 GO:0005515
Mal1g0790 1660 SMART WD40_4 1296 1339 IPR001680 GO:0005515
Mal1g0790 1660 SMART WD40_4 1342 1379 IPR001680 GO:0005515
Mal1g0790 1660 SMART WD40_4 1424 1461 IPR001680 GO:0005515
Mal1g0790 1660 Gene3D Transferase(Phosphotransferase) domain 1 200 314 - -
Mal1g0790 1660 SUPERFAMILY BEACH domain 337 580 IPR036372 -
Mal1g0790 1660 PANTHER GH12955P 4 1660 - -
Mal1g0790 1660 CDD Beach 350 580 IPR000409 -
Mal1g0790 1660 CDD PKc 207 288 - -
Mal1g0790 1660 SUPERFAMILY Protein kinase-like (PK-like) 718 812 IPR011009 -
Mal1g0790 1660 SUPERFAMILY Protein kinase-like (PK-like) 206 290 IPR011009 -
Mal1g0790 1660 Gene3D BEACH domain 340 603 IPR036372 -
Mal1g0790 1660 ProSiteProfiles BEACH domain profile. 336 606 IPR000409 -
Mal1g0790 1660 Pfam WD domain, G-beta repeat 1344 1379 IPR001680 GO:0005515
Mal1g0790 1660 Pfam WD domain, G-beta repeat 1525 1561 IPR001680 GO:0005515
Mal1g0790 1660 Gene3D - 1293 1490 IPR015943 GO:0005515
Mal1g0790 1660 ProSiteProfiles Trp-Asp (WD) repeats profile. 1530 1563 IPR001680 GO:0005515
Mal1g0790 1660 SUPERFAMILY WD40 repeat-like 1298 1658 IPR036322 GO:0005515
Mal1g0790 1660 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1530 1563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0790 Mal-Chr1 9455349 9464113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0790 1305 1562 Miscellaneous Gene Families AT5G08390 22.605 1.72e-07 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Mal1g0790 Beach 2.5e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0790 K17601 - gmx:100809116 2811.56