Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0779 ATGAATATGAATGTGAAGGAGGAATTTGTGGGAGGAAGTTCTTCCTTTTGTGTGATTGGTGATCCTCAACCAATGGAAGGACTTCATGAAAATGGCCCTCCACCATTCCTCACAAAAACATATGATATAGTTGATGATCCTTCCACAAATCATATAGTTTCATGGAGTACAGGGAATAATAGCTTTGTTGTTTGGGATCCTCAAGCCTTTTCCATTAGTCTTCTCCCTAGATTCTTCAAGCACAACAATTTCTCCAGTTTTGTCAGGCAACTTAATACCTATGGGTTTAAAAAGGTTGATACAGATAGGTGGGAATTTGCTAATGAAATGTTTCTAAGAGGACAAAAAATCCTTTTGAAGAATATTAGGAGGAGAAAAGCAAATCAATCTCAAGTAATGCAACAAGCACTAGACCCGTCATGTGTTGAGCTGGGAAGGTTTGGATTAGACGGAATCGAAGTAGATTGGTTGAGGCGCGACAGACAAGTTCTAATGGTTGAGTTAGTGAAACTTAGACAACAACAACAGAATACTAGAACTCACCTTGAAGCAATGGAAGGAAGGCTTAAAAGAAGTGAAGAGAAAGAAAAACAGATGATGAATTTCTTGGCAAGGGCAATGCAAAATCCTGATTTCTCGCAACAGATAGTTCAGCAGAAGGAATGGAGAAAAGAGTTAGAGGAAATTTTTTCTAAGAAGAGAAGGAGAACTATTGATCAAGGTCATAGTAAGGTTGAAGTAGGTGATGAATTAGGATATGTTGATGAAGAGTGCTTAACTTTTGTTAAACTTGAACCACATCAAGATTGTGAGGAAGACTCCAATAAAATCAATCAAGGTATTGAAGATGAAGTAGATGTTGAAGATGTTGGTGCATTGGCTGAGCAACTTGGTTATCTTGCGTCCGGTCCTCCTAAATAG 921 0.3822 MNMNVKEEFVGGSSSFCVIGDPQPMEGLHENGPPPFLTKTYDIVDDPSTNHIVSWSTGNNSFVVWDPQAFSISLLPRFFKHNNFSSFVRQLNTYGFKKVDTDRWEFANEMFLRGQKILLKNIRRRKANQSQVMQQALDPSCVELGRFGLDGIEVDWLRRDRQVLMVELVKLRQQQQNTRTHLEAMEGRLKRSEEKEKQMMNFLARAMQNPDFSQQIVQQKEWRKELEEIFSKKRRRTIDQGHSKVEVGDELGYVDEECLTFVKLEPHQDCEEDSNKINQGIEDEVDVEDVGALAEQLGYLASGPPK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0779 306 Gene3D - 28 126 IPR036388 -
Mal1g0779 306 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g0779 306 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g0779 306 PRINTS Heat shock factor (HSF) domain signature 36 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g0779 306 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 270 IPR027725 -
Mal1g0779 306 SMART hsfneu3 32 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g0779 306 ProSitePatterns HSF-type DNA-binding domain signature. 75 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g0779 306 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 16 270 - -
Mal1g0779 306 Pfam HSF-type DNA-binding 36 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g0779 306 SUPERFAMILY "Winged helix" DNA-binding domain 31 125 IPR036390 -
Mal1g0779 306 Coils Coil 175 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0779 Mal-Chr1 9339997 9349168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0779 17 253 HSF AT3G22830 68.293 1.26e-117 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal1g0779 HSF_DNA-bind 1.5e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0779 K09419 - gmx:100809515 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2956 7 92744553 92747017 Mal1g0779 1 9339997 9349168 PCT