Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0768 ATGGCCGTCGGTAAGAACAAGCGGATCTCTAAGGGGAAGAAAGGTGGCAAGAAGAAAGCAGTTGATCCATTTGCCAAGAAGGATTGGTATGATATTATGGCTCCTTCGGTCTTCCAGGTGAAGAAGGTTGGCAAAACTCTCGTGTCTCGTACTCAGGGTACCAAGATTGCTTCAGAAGGACTCAAGCATAGAGTGTTTGAGGTTTCAATGGCTGATCTTCAAGGAGATGAAGAGCATGCATTCAGGAAGATTAGGTTGAGAGCTGAAGATGTGCAAGGGAAAAATCTTTTGACAAATTTCTGGGGGATGAATTTCACAACTGACAAACTGAGGTCACTGGTGCGTAAGTGGCAAACTCTTATTGAAGCTCATGTGGATGTGAAGACTACTGATAATTACACATTGAGAATGTTTTGCATTGGATTTACCAAGAGGAGAGCTAACCAGGTGAAGAGGACCTGTTATGCACAATCTAGCCAAATTAGACAGATCCGTAGAAAGATGACAGAGATCATGATCAACCAAGCAACTTCCTGTGATTTGAAGGAATTGGTCAGCAAGTTCATTCCTGAGGTAATTGGAAAAGAGATTGAGAAAGCCACATCTAGTATTTACCCTTTGCAGAATGTGTTCATTCGAAAAGTGAAGATCCTTAAAGCTCCTAAGTTTGATCTTGGGAAATTGATGGAGGTTCATGGAGATTACTCTGAGGATGTTGGCACAAAGGTAGCCAGGCCTGCCGATGAAATGGTGGTAGAGGAACCTACTGAAATTGTTGGAGCTTGA 786 0.4275 MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIMAPSVFQVKKVGKTLVSRTQGTKIASEGLKHRVFEVSMADLQGDEEHAFRKIRLRAEDVQGKNLLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMTEIMINQATSCDLKELVSKFIPEVIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKVARPADEMVVEEPTEIVGA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0768 261 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Mal1g0768 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 261 - -
Mal1g0768 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 261 - -
Mal1g0768 261 Hamap 40S ribosomal protein S1 [RPS3A]. 1 261 IPR027500 GO:0003735|GO:0005840|GO:0006412
Mal1g0768 261 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0768 Mal-Chr1 9160228 9162903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0768 1 261 Cytoplasmic Ribosomal Protein Gene Family AT3G04840 84.733 1.14e-163 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0768 K02984 - gmx:100813273 470.314