Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0760 ATGAAAGTGGAGAGGAAAGGTCTGATTGATCTAGTTTCTTCTGGTTCAGAACATGAAAAGGAAGAGGAAAGTGCCAAATTCTCTCAGAGTCCCAAGAAGCTTGAGTCTTGCAAACCACTTGCATTTGTTCCTAAAGTTGTACGAAGTTCTGATTCGTCACCTCAAATTGAGAAGGACCCCAACAAAACTCTAGTTTCAAAGCTACACAAAAAAGGATGTAATTGCAATAAATCAAGCTGCCAGAAGAAATATTGTGAATGTTTTAAGGGTGGCGTTGGTTGCTCCCCAAGTTGTAAATGTCAAGGGTGTGAGAATATATATGGTAGAAAGGGTAGTGAGGCTGAAACACAATCTGAGCTTGAAGAAACAGAAGCATCACAGATTTCCAGGTTTGATATGCTAATTTTTGTGTTTGACGAAATGATAAATTTGATGTTCATTATTGATCTCTTATTCATCAATCGGAAAGCCGCAAAGATCTTGTGCTTAATTGTTTGGCAGCCAAAACCAAAGCGTTTGTGGAATCAAATGCTATTGGATAAACGTGAAAATGAAGTTGAAACATCTCATACTTGCAGTGGTGGCAGGAACTCGGCATTAGAATGA 606 0.3861 MKVERKGLIDLVSSGSEHEKEEESAKFSQSPKKLESCKPLAFVPKVVRSSDSSPQIEKDPNKTLVSKLHKKGCNCNKSSCQKKYCECFKGGVGCSPSCKCQGCENIYGRKGSEAETQSELEETEASQISRFDMLIFVFDEMINLMFIIDLLFINRKAAKILCLIVWQPKPKRLWNQMLLDKRENEVETSHTCSGGRNSALE* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0760 201 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 70 105 IPR005172 -
Mal1g0760 201 SMART CXC_2 68 109 IPR033467 -
Mal1g0760 201 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 30 126 - -
Mal1g0760 201 ProSiteProfiles CRC domain profile. 1 108 IPR005172 -
Mal1g0760 201 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 30 126 IPR044522 GO:0003700
Mal1g0760 201 MobiDBLite consensus disorder prediction 1 34 - -
Mal1g0760 201 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0760 Mal-Chr1 8898544 8899937 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0760 32 126 CPP Transcription Factor Family AT3G22760 53.684 3.76e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mal1g0760 TCR 3.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0760 - - gmx:100815907 133.265