Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0757 ATGGCGGCACTAGATCACAAGAACACCCTTGTTTCAAACTCTCAAGAGGATGATTCTTTCTTTGACTACCTCAATAGTTTATCTCCTTTAAACACCAAAATGTATGTTGGAGTTGGAGCTACTGAGACGTTGAACTCACTTGGCATGGATTATCCTCTTTTCACATCACTCGATGTGACCTCTTACGACAAATCCATATTCCTCATCAGGAATAACCTGTTGGACACATCAAATCCTGAAGTTTCATTTGAGGATGTAAATAACATATATTCACATGAAGAAGCTCCTACAGATTCAACTCATGCATGGATTGACACAAGTGAGCTACATGATCCTCTAATCTCAAGTGATGATGCTAAGTATCTTCTTGAATTACTTGACAAGCAAGAACCAGATGGTACGGATGTACAAGATGTTTCTGTCAACGATGCAGTTGAAGGTGGAACATATATTCAGGAAGTACCAGATTGTGATTACGATAACTTAATTAGTACAACACACTCTGTGACTCTGTTACCACAATCTACCACTAACATTAATTACAAAATGCAAACTGTTGATCCACTTGTTTTTGGTTCAAAACATGAAATTAAAGAGAATCCTTCAGAACCAATAGCCGCAACAGACAGAAATCAAACACGGGACAATCTTGCCAATGTTTCTTTAATGGATAGCAATCCAATTAAGAGAGGGGATGATGAGCTTGCACGTATTAGACGCAGTATACAGAGGAGCTGTCAAGGCTATGAGTCCGAGATGACCAGTTTGCAAAGGAACAACTCTGTTTATACTTCAAACATCAGTTCCTGTACGACAAAATCTGATGAGAGGAGTGCTATTAATTTAAAGCCATTGCTTCCTAATAAAAACCCTAGTGATTCACAGAAGTGTGTTTTGCAAGGAAATGGTTTTTACTGGAATGCACTTCCAGCCTTAAATCATTACGAAGGCATAGAAAATGAAAAGATGTTTTCTCGAAGGAAACCTGAATCACCAAGCTGCACTTATTCTTTGCATATTTCTTCAAGGCAAGGACATCCACTATCGCAAGTCCCTGCACCAATGGAGAGACATTTGCGGCTATCCGAGAATGAAGATGTCACCAAGTCATTAGTTCACATTCCTAGTGAAAATTTTCGTCAGAGTACTCCCAAAAGGACGAGTGAAGTGCAATTTAAGGACCTAACGAATAAAAAGTTAGATCAAAACATGAAAGTGCAGAGGAAAGGCCCGATTGATCTAGTTTCTTCTGGTTCAGAATATGAAAAGGAAGAGGAAAGAGCCGATTTCTGTCAGAGTATCCCCAAAAGGAAGAGGAAAGTTTACTGTGACTGCTTTGCTGCTGGAGTCTGCTGCACAGGACCATGCTCATGTCAAGACTGCTTGAATAAACCTATTAATGAAGATACAACTCTGCAAGGTCCCAAGAAGCTTGAGTCTTGCAAACCACTTGCATTTGTTCCTAAAGTTGTACGAAGTTCTGATTCGTCACCTCAAATTGAGAAGGACCCCAACAAAACTCTAGCTTCAAAGCTACACAAAAAAGGATGCAATTGCAATAAATCAAGCTGCCAGAAGAAATATTGTGAATGTTTTAAGGGTGGCGTTGGTTGCTCCCCAAGTTGTAAATGTCAAGGGTGCGAGAATATATATGGTAGAAAGCGTAATGAGGCTGAAACAAAATCTGAGCTTGAAGAAACAGAAGCATCACAGATTTCTAGGCCATTGCTTCCATTTCATCAATCGGAAAGCCACAAAGATCTTGTGCTTAATTGTTTGGCAGCCAAAACCAAAGCGTTTGTGGAATCAAATGCTATTGGATAA 1824 0.3958 MAALDHKNTLVSNSQEDDSFFDYLNSLSPLNTKMYVGVGATETLNSLGMDYPLFTSLDVTSYDKSIFLIRNNLLDTSNPEVSFEDVNNIYSHEEAPTDSTHAWIDTSELHDPLISSDDAKYLLELLDKQEPDGTDVQDVSVNDAVEGGTYIQEVPDCDYDNLISTTHSVTLLPQSTTNINYKMQTVDPLVFGSKHEIKENPSEPIAATDRNQTRDNLANVSLMDSNPIKRGDDELARIRRSIQRSCQGYESEMTSLQRNNSVYTSNISSCTTKSDERSAINLKPLLPNKNPSDSQKCVLQGNGFYWNALPALNHYEGIENEKMFSRRKPESPSCTYSLHISSRQGHPLSQVPAPMERHLRLSENEDVTKSLVHIPSENFRQSTPKRTSEVQFKDLTNKKLDQNMKVQRKGPIDLVSSGSEYEKEEERADFCQSIPKRKRKVYCDCFAAGVCCTGPCSCQDCLNKPINEDTTLQGPKKLESCKPLAFVPKVVRSSDSSPQIEKDPNKTLASKLHKKGCNCNKSSCQKKYCECFKGGVGCSPSCKCQGCENIYGRKRNEAETKSELEETEASQISRPLLPFHQSESHKDLVLNCLAAKTKAFVESNAIG* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0757 607 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 238 570 - -
Mal1g0757 607 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 11 257 - -
Mal1g0757 607 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 238 570 IPR044522 GO:0003700
Mal1g0757 607 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 11 257 IPR044522 GO:0003700
Mal1g0757 607 SMART CXC_2 437 467 IPR033467 -
Mal1g0757 607 SMART CXC_2 512 553 IPR033467 -
Mal1g0757 607 Coils Coil 239 259 - -
Mal1g0757 607 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 514 549 IPR005172 -
Mal1g0757 607 ProSiteProfiles CRC domain profile. 427 552 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0757 Mal-Chr1 8855661 8859271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0757 419 591 CPP Transcription Factor Family AT3G22780 48.000 7.78e-44 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mal1g0757 TCR 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0757 - - mtr:MTR_1g103230 821.231