Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0754 ATGGAATCCAATAACCCTTACAATCTCGATGACTACGAGGGTTTTGATTGGGAAGCACTTGCAAGAGAAGCTGACGATGCCGTTATTCAATTGAAAAGTGACGCAAAATCAAATGGAAACGAAGCGGAAAAGGTTAAAGGAAAGGGAAAAGGAAAACAATCTACTCTTGATAATTTTGTTGGAATTGCGAAAAAGGAAAATCAAACGGTTCAGGTTCAAGATAGTGATGCTGAATGTGAAGAATCTACTTGTACTCATCAGATTGATACTGAAGCTGCCAAAACATGGATTTACCCAGTTAATGTTCCTCTCCGTGACTATCAATTCCATATTACCCAGACTGTACTCTTTCAAAACACATTGGTCGCCTTGCCAACAGGACTTGGCAAGACTCTCATTGCTGCTGTTGTCATGTTTAACTACTTTAGATGGTTTCCTGAGGGAAAAATAGTATTTGCTGCTCCGTCTCGACCACTTGTCATGCAGCAGATTGAAGCATGCCATAACATTGTGGGGATACCTCAAGAATGGACAGTTGATATGACTGGTCAGTTAAGTCCTCCCAAAAGAGCTCGTTTGTGGAAAACAAAGCGAGTTTTCTTTGTCACTCCACAAGTTTTGGAGAAAGACATCCATTCTGGTAAATGTTTGGTGAAGTCCTTGGTATGTTTGGTGATTGATGAAGCTCACAGAGCAATGGGAAATTACTCTTATTGTGAAGCAGTTCGTGAGTTAATGGCTGTACCGGTGCAACTAAGAATATTAGCGTTAACTGCAACACCAGGATCAAAGCAGCAGACCGTTCAGGATGTTATTAATAATTTGCATATCTCCAAGCTTGAACATCGTAGTGAAACTGACCATGATGTTATCTCATATGTTCACGACAGGAAGATAGAGTTGATACAGGTTGCAATGGGCCAAGATGCTGTAGAAATAAACAATAAGTTTTTGGAAGTGATACGCCCTATTGTAGCCAGGCTTACTAATATTGGGGCCATTCAGAACAGAGATTATCGTACTCTGAGCCCTTGTGTATTACTTGAAATGAGGGAAAAGTTTCGTCAGGGGCACATGCAAGATGTTTCACATATCAACCATGGAGATGTTGAAGGGTATTTTGGAGTTCTTATTACTCTTTATTACATCCATAAACTGCTTTCAAGTCACGGAATAAGGCCAGCATATGAGATGCTCGAAAGAAAATTGAAGCAAGGGTTTTTTGCAAAATATATGTGTAAAAATGAAGATATTCTGAAAGCAAGGCAACTAATGCAGCAAAGCTTGTCTCATGGTGCGTCGAGTCCAAAGTTGTCCAAAATGCTAGAAGTATTACTGGAGCATTTCGAAACCAATGACCCACAAAACTCCAGGGTGATTATTTTCTCCAATTACAGAGAAAGTGTCAGGGACATATTGGTTGCACTTGGAGGTACTGGGGATCAAGTTAGAGCTACTGAGTTTATTGGTCAAAGTTCAGGGAAAACAATGAAAGGTCAGTCCCAGAAAGTTCAACAGGCTGTGCTTAAGAAATTTCGGTCTGGTGCCTACAATGTCATTGTTGCTACGTCAATCGGTGAAGAAGGTCTTGATATCATGGAGGTTGATCTTGTCATATCTTTTGATGCTAATATTTCACCACTTAGAATGATTCAGCGAATGGGGAGAACTGGAAGAAAGCATGATGGACGAGTTGATATCCTTTGA 1707 0.403 MESNNPYNLDDYEGFDWEALAREADDAVIQLKSDAKSNGNEAEKVKGKGKGKQSTLDNFVGIAKKENQTVQVQDSDAECEESTCTHQIDTEAAKTWIYPVNVPLRDYQFHITQTVLFQNTLVALPTGLGKTLIAAVVMFNYFRWFPEGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTVDMTGQLSPPKRARLWKTKRVFFVTPQVLEKDIHSGKCLVKSLVCLVIDEAHRAMGNYSYCEAVRELMAVPVQLRILALTATPGSKQQTVQDVINNLHISKLEHRSETDHDVISYVHDRKIELIQVAMGQDAVEINNKFLEVIRPIVARLTNIGAIQNRDYRTLSPCVLLEMREKFRQGHMQDVSHINHGDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKQGFFAKYMCKNEDILKARQLMQQSLSHGASSPKLSKMLEVLLEHFETNDPQNSRVIIFSNYRESVRDILVALGGTGDQVRATEFIGQSSGKTMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVDIL* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0754 568 Pfam Type III restriction enzyme, res subunit 104 261 IPR006935 GO:0003677|GO:0005524|GO:0016787
Mal1g0754 568 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 111 279 IPR014001 -
Mal1g0754 568 PANTHER FANCONI ANEMIA GROUP M PROTEIN 14 565 IPR039686 GO:0006281|GO:0043138
Mal1g0754 568 SMART ultradead3 100 293 IPR014001 -
Mal1g0754 568 MobiDBLite consensus disorder prediction 32 53 - -
Mal1g0754 568 MobiDBLite consensus disorder prediction 37 51 - -
Mal1g0754 568 Gene3D hef helicase domain 308 430 - -
Mal1g0754 568 Pfam Helicase conserved C-terminal domain 443 560 IPR001650 -
Mal1g0754 568 CDD SF2_C_FANCM_Hef 435 568 - -
Mal1g0754 568 SMART helicmild6 471 561 IPR001650 -
Mal1g0754 568 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 437 568 IPR001650 -
Mal1g0754 568 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 14 565 - -
Mal1g0754 568 CDD FANCM_ID 311 425 - -
Mal1g0754 568 Gene3D - 100 294 IPR027417 -
Mal1g0754 568 Gene3D - 431 568 IPR027417 -
Mal1g0754 568 CDD DEXDc_FANCM 102 283 IPR044749 GO:0005524
Mal1g0754 568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 565 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0754 Mal-Chr1 8832862 8841536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0754 442 559 Eukaryotic Initiation Factors Gene Family AT3G13920 31.356 1.97e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0754 K10896 - gmx:100820078 914.064