Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0749 ATGTTCACTTTCCCTAATAATTTCCCTTCATCATCTTCTTCTTCTTCTTACCCTAGTAGTACCCTTTCTTTTCTCATTGACAATCCTCAAAATAATGATTTTCCAAATAACACTATTCTTGATGATCCATTACTTTCTTCTATTCCTTTCACTACATCAACACATCATGATGTTGTTATTCCATTCCCTGATTCAAATTTTGCAGATTGTAACAACAACACTGCAATGTTTGAACAAGATAATAATAATGGTTACAACTTTGGTGTTACTAGTAGTTTTTCAATTCCAAATTTTGTTGTGACAGAGCAGAAACAACAACCAGCAACAGTGATAGGAGGAAAGAAAGATAGACACAGTAAGATTCACACATCACAAGGTTTGAGAGACAGAAGGGTAAGATTGTCAAGTGAAATAGCTAGAAAATTCTTTGATCTTCAAGATATGTTAGAGTTTGACAAACCAAGTAACACACTTGAGTGGCTTTTCACTAAATCTGACACTGCAATCAAAGAACTAGCTAGAACTAAAAACTCTTCTTCTTACAACAATAATCCATTTTTTGATTCAAATAGCAACAAATCATTTTCCGGTGGCGGCGGTGGTGGTGGTGATGGTAGTTTTTCTTCTAAAGGGAGAAAATTGAAATGGTCACAAAAAGAAGAAACAAAAAAAGAGTCAAGAGAAAGAGCAAGAGCAAGAGCAAGAGAAAGAACTTGTTACAAGATGTGTAGCAGTGGAAGAATGCAACAAGAAGAAATTAGGTATCCTACTGCATCAGATTCAACAAATACTCAACAAATGCTGCAACAATTGATGTCATCTTCAACATCACCTGTTGATAGTACTGAAACTGAGGCTTATGCAAGATGGCGTCAGCTTCTTCAACTTCAAACCTATAACAACAACAACAACCCTTCAATTCACCTATTGGATAGTGAAATACCTAGAGATCATCATGGATTTAATGTTATTGAAGAATCTATTATGATAAAAAGGAACATGATGTCTTCTTCTTCTCAATATCAACATCAACATCACCAAAACCTAACTCCTACTATCCCTAAGGAATTACCAAGTTTCAACAGCAATATTAATGATTACTCCTTATTCCCTTATTCCACTCCAAATTGGGAGACTAGTTCCAACTTTTGTGGAATAGCCACCATGAATCTATCTACTTGCTTCATGAATCAGTGGTAA 1200 0.35 MFTFPNNFPSSSSSSSYPSSTLSFLIDNPQNNDFPNNTILDDPLLSSIPFTTSTHHDVVIPFPDSNFADCNNNTAMFEQDNNNGYNFGVTSSFSIPNFVVTEQKQQPATVIGGKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSDTAIKELARTKNSSSYNNNPFFDSNSNKSFSGGGGGGGDGSFSSKGRKLKWSQKEETKKESRERARARARERTCYKMCSSGRMQQEEIRYPTASDSTNTQQMLQQLMSSSTSPVDSTETEAYARWRQLLQLQTYNNNNNPSIHLLDSEIPRDHHGFNVIEESIMIKRNMMSSSSQYQHQHHQNLTPTIPKELPSFNSNINDYSLFPYSTPNWETSSNFCGIATMNLSTCFMNQW* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0749 399 MobiDBLite consensus disorder prediction 177 197 - -
Mal1g0749 399 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 279 IPR005333 GO:0003700
Mal1g0749 399 MobiDBLite consensus disorder prediction 177 233 - -
Mal1g0749 399 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 22 279 - -
Mal1g0749 399 MobiDBLite consensus disorder prediction 111 128 - -
Mal1g0749 399 Pfam TCP family transcription factor 113 244 IPR017887 -
Mal1g0749 399 MobiDBLite consensus disorder prediction 108 128 - -
Mal1g0749 399 ProSiteProfiles TCP domain profile. 114 172 IPR017887 -
Mal1g0749 399 ProSiteProfiles R domain profile. 224 241 IPR017888 -
Mal1g0749 399 MobiDBLite consensus disorder prediction 213 233 - -
Mal1g0749 399 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 302 394 - -
Mal1g0749 399 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 302 394 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0749 Mal-Chr1 8668667 8669866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0749 114 256 TCP Transcription Factor Family AT1G67260 42.012 8.87e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal1g0749 TCP 4.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0749 - - mtr:MTR_1g103380 565.459