Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0722 ATGGAACCGGGAACGAGAATAGCGAGTCCTTCCGGGGTTGTGGTGAAGAATAGGAGTTCTTCGGGTTGTTTGATTGTTAGGAAGAAAGGGGACGGTTTGGGTGGTGGTGTTGGCGGTGGTTCGAGCTCGCGGAAGCAGTATGAATCGAAGAAATTGAGGAAAAAGGCGAAGGTGGATTCGAGTGATTCTGAATCGAGTGGGGAGTTAGTGATGCCGCCTGCTAGGAGGCTTGGGCCGGAGACAATTCGAGTTTGTAATAGTTTGATTGCTCTTGAGCGAGGTGGTGGTGTTGGTGGGGGGGAGATTAGCAGGAAGAGGGAGAGAATGGAGCAGATTCGGCGTAATGGGGATGGTGCGGTTGAGGGGAATGGGTTGGAGAGGAGGGAGAAGAAAATTAAGTTGGATGTGTTTGATTTTGATGAGTATGATGGTGCGGGTGTGGAAAGGATGAGAAGGAGGCAGTTTGATAATGATGGGGTTGGTTTAGGAGGAGGAAGGTTTATGGGAACAATGCATGCTGGTAGAGGTGGCATTGATAGGGAAATTGAAACTGGTTCAAGTAGACACATTGTGGATAAGAGGAAAAAAGCGTATTATGACAGGGCAAGTGGCTTGCATCTTGGAGATAGTGGTGACAATAGTAGTAGGATAAAGATGAAAAGGGATGGACCTCAGCGTCCTCTACCCTCGTTGAAGGAGAAGTTTAAACCAGATGAGTCCATTAGGGTTCAGGGGAAAAATGGTGTTTTGAAGGTGATGGTTAATAAGAAGAAGGTGGGTGGGTCAGTAGAACCCTATGATCATCGTAAACCAGTAGAAAGTAGACAAAGTTTAAGGGCTGAGGGTACTTCTAAGAGGAACGTTCCGATCCATTCTTCATCACACTTAGAAACAAAATCTGCCGAGAAACAGGGTTTACTTGTTAGGCCAGAGAAGAAACAGATAACAACAAGAAAATCCTTGTCAAGTAAGGAGGACATCAAGGGAAAGGAGCAAGATTCAGATGACAATGACACATCAATGAATCTGGAAGTAAAAAATATTAAATCTCACACACCTTCAAAAAAGATAACCTCTGAAAATGAACAGACTCCTGTACATGATAAGCTCCCAACTACAAAGTCGAGTGAAGGAAAAATCAGGCGAGGTAGTGGCACAGAAAAGCAGAAACTACGAGAACAAATACGGGAGATGCTTCTGAATAAAGGCTGGACCATAGACTATCGCCCACGTAGGAATAGAGACTATTTAGATGCAGTTTACATTAATCCGGCGGGAACAGCTTATTGGTCCATCATCAAGGCCTATGATGCACTTCAAAAGCAATTGATTGAGGATGAGCAAGCAGCCAAAGGGGAGAGTTCTTCTTTTGCTCCTATTGCTGATGATGTGCTCAGTCAATTGACAAGGAAAACTCGGAAGAAGATGGAGAAAGATTTGAAGATGAAGAAGAAGAAGCAAAGAATTGATGACATTGATAGCGGAAAAGAACGGCAGGTTAAAAGAACTTCTGGCAAAAAGCATCACATGAATGGCATTGATAGTGATAGCAATGAAGACAAGTTAAGCTCCTTTATCAAGCAACAAGGAAGTAAATCAATGAAAGCTAAATTGACTGAAAATGCTGTTACAGGTGGTAGCTCTAAAAGCGAGAATGCTACAATTGAAAAACCATTCTCTGAAAGTGATCCTCAGAACCTACATGGAAGGAAAAGTAGAAAACATGGAAGGTGCACTTTATTAGTTCGTAGTTCTAACAAGGGATTGAATTCAGAATCTGATGACTTTGTTCCATATACGGGCAAACGAACAGTGCTTTCCTGGTTGGTTGACTCAGGGGTAGTACAGGTAAGTCAAAAGGTTCAGTACCGCAGGAGGAAGAAAGTAATGCTGGAGGGATGGATTACAAGAGAAGGCATTCACTGTGGCTGCTGTAGTAAGATCCTCACAGTTTCAAAGTTCGAGCTTCATGCAGGAAGCAAATTGCCTCAGCCATATCAGAACATATATTTAGATTCTGGGTTTTCTCTTCTACAGTGCCAGATAGATGCGTGGGAAAAACAAGAGAATTTTGGGAAAATCAGTTTCCATTCAGTAGATATTGATGGTAATGATCCAAATGATGATACCTGTGGTATATGTGGAGATGGAGGAGATTTGATCTGCTGTGATGGTTGTCCATCAACATTTCATCAGAGTTGCTTGGGTATTCAGATGCTCCCCCCTGGGGACTGGCATTGTCCAAATTGCACCTGTAAATTTTGTGGACTAGCCAGTGCAACTACTGACAAAGAAGATGATGCAACTGTAAATGCTCTACGTACTTGTGACTTATGCGAGAAAAAATATCATGACCGCTGCACTAAGGATACGGGTGCCCTTCTTGCCAACTCCAATATGCCGGAGCATTCCTTTTGTGGAAAAAGCTGCAAAGAGCTTTTTGAGAACTTGAAGAAGTACCTTGGTACCAAGCATGAACTTGATGCAGGCTTTACATGGTGTCTTGTTCGTAGAACAGATGATGATTCGGAGGCAGCTAGTAGGGGAGTCACCCATAGGGTGGAATGCAACTCCAAGCTGGCTGTTGCACTGACTGTGATGGACGAATGCTTTTTACCTGTTGTTGATAGGAGGAGTGGAATCAATATAATCCATAATAGTTTATATAATAGCGGGTCAAACTTCAGTCGGTTGAATTATACTGGCTTTTATACCGCTATTTTGGAGCGGGGTGATGAAATAATTTCTGCAGCGTCCATCAGGTTCCATGGGACCAAGTTAGCAGAGATGCCATTCATTGGAACTCGCCATATATATAGGCATCAGGGAATGTGCCGCCGGCTTTTTTCTGCCATTGAACTCGCTCTTTGCTCATTGAAGGTTGAGAAACTGGTTATTCCTGCAATTTCTGAACTTGTTCATACATGGACAACAGTTTTTGGCTTCACACATCTTGAGGAATCACTTAGGCAAGAAATGAGGTCATTGAATATGTTGGTGTTCCCTGGTATTGATATGTTACAGAAGCTTCTAGCGGAGCAAGGAAAACTTGAGGATGCTGAGCAATTTGAAAATGGAGATGTGGGTTCTATTAAGCCTGCTGTGGTCAATGGGTTAGATATCGATTCATCGGCTTTGCAACATCCTCATGTAAGTGCGGATGCTAGATCCAATCCTGCCAAAAAGATTAACAATGAAATTAGTGATGCTTCTCAAGATATAAGCAATCAAGGTTTGGCTGGCAGGACTGTGTTCTCGAAATCTCATTCGGAGGAAAGATTATCTGATTCTGTTTCAGAAAATTGTGCTTCTCCTTCTAATTCTAGTCATGGGGTTCTCGAAAAAAAGAATAAAATACCAATGTCTTCTCCTATCAATGATCCATCACCCAAATGTCGACTCATTTCACCAAATGACATTTCTACAAACGGTCCTCCATCGGATCTCTCAGATTGTCATGAAATTCCATCTCTGGCTCAAGCAACTGCATGTTCTGACCTAGGTACTGTAAAAAACTTGGTTGAACCTGCTTCTGAGGGGAAACCCCATGCTTTCACTGATATGAAAAGTGATTCACCAGGACTTGACCGAAATCCTGTGTCGGATTCTCAAGTGGCGGATAATGCTTTGTCTTTTAAAGAGTTTGATATGAATGATGCTCATGTTGAGGTTCTTGAAGCTGGTCCTTTAGTGAATTCATCTCAGGCGAACAATACCGAAGAGAATAATGAAAATGTAGATGTCTTTGGTTCTGTTCTTAATCATGCTATCACTGATATGAATTGTGATTCACCAGGGCTTGACCAAACTCCTGTGTCGGATTCTCAAGTGGCGGATAATGCTTTGTCTTCAAAAGAGTTTGATATGAATGATGCCCAAGTTGAGGTTCTTGAAGCTAGTCCTTTAGTGAATTCATCTCAGGCGAACAATACCAAAGAGAATAATGAAAATGCAGATGACTCTGGTTCTGTTCTTAATCATGCTATCACCGATATGAATTGTGATTCACCAGGGCTTGACCAAAATCCTGTGTCGGATTCTCGAGTATCAGATACTGCTTTGTCTTCAAAAGAGTTTGATATGAATGATGCTCATGTTGAGGTTCTCGAAGCTGGTCCTTTAGTGAATTCATCTCAGGCGAACAATACCGAAGAGAATAATGAAAATGCAGATGTCTCTGGTTCTGTTCTTAATCATGCTATCACCGATATGAGTTGTGATTCACCAGGGCTTGGCCAAAATCCTGTGTCGGATACCGCTTTGTCTTCAAAAGAGTTTGATATGAATGATGCCCAAGTTGAGGTTCTTGAAGCTAGTCCTTTAGTGAATTCATCTCAGGCAAACAATACCGACGAGAATAATGAAAATGCAGATGTCTCTGGTTCTGTTCTTAATCATGCTATCACTGATATGAATTGTGATTCACCAGGGCTTGACCAAAATCCTTTGTCGGGTTCTCGAGTGGCGGGTAATGCTTTGGTTTGTAAAGAGTTTGATATGAATGATGCCCATGTTGAGGTTCTTGAAGCTGGTCCTTTAGTGAATTCATCTCAGGCGAACAATACCAAAGAGAATAATGAAAATGCGGATATCTCTGGTTCTGTTCTTAATCACGCTTTCACGGATATGAGAAGTGATTCACCAGGACTTGAGCGAAATTCTTTGCTGGATTCTCAAGTGGCGGATAATGCTTTGCCTTTTAAAGAGTTTGATATGAATGATGCCCATGTTGAGGTCCTTGAAGCTGGCCCTTTAGTGAATTCATCTCAAGGGAACAATACCAAAGAAAATAATGAAAATGTAGATGTCTCTGGTTCAGCTCTTGATCACGCTTCCTCTGATATGAATAGTAATTCACCAGGGCTTGACCAAAATCCTTTGGTGGCTTCTCAAGTGGCGGATAATGCTTTGCCTTTTAAAGAGTTTGATGTGAATGATGCCCGTGTTGAGGTTCTTGAAGCTGGTCCTTCAGTGAATTCATCTGAGGGGAACAATGCCAAAGAGAATGATGAAAATGTAGATGTCTCTGGTTCTGTTCTTCATCATGCTGGTGAGAGATCCTTGCAGGTAAGATCTGATAATGGTGAAATTGCATATGAGGGGGAAAAGAATTCACATTTGGACACAGAAGTTGCTTCAAATGAATTGCATTTGGATGAAACTGGCCTATATGCTTCTGGTGATGGTACTGAGACTGATCAAGCATTGAATGGTTGA 5217 0.4213 MEPGTRIASPSGVVVKNRSSSGCLIVRKKGDGLGGGVGGGSSSRKQYESKKLRKKAKVDSSDSESSGELVMPPARRLGPETIRVCNSLIALERGGGVGGGEISRKRERMEQIRRNGDGAVEGNGLERREKKIKLDVFDFDEYDGAGVERMRRRQFDNDGVGLGGGRFMGTMHAGRGGIDREIETGSSRHIVDKRKKAYYDRASGLHLGDSGDNSSRIKMKRDGPQRPLPSLKEKFKPDESIRVQGKNGVLKVMVNKKKVGGSVEPYDHRKPVESRQSLRAEGTSKRNVPIHSSSHLETKSAEKQGLLVRPEKKQITTRKSLSSKEDIKGKEQDSDDNDTSMNLEVKNIKSHTPSKKITSENEQTPVHDKLPTTKSSEGKIRRGSGTEKQKLREQIREMLLNKGWTIDYRPRRNRDYLDAVYINPAGTAYWSIIKAYDALQKQLIEDEQAAKGESSSFAPIADDVLSQLTRKTRKKMEKDLKMKKKKQRIDDIDSGKERQVKRTSGKKHHMNGIDSDSNEDKLSSFIKQQGSKSMKAKLTENAVTGGSSKSENATIEKPFSESDPQNLHGRKSRKHGRCTLLVRSSNKGLNSESDDFVPYTGKRTVLSWLVDSGVVQVSQKVQYRRRKKVMLEGWITREGIHCGCCSKILTVSKFELHAGSKLPQPYQNIYLDSGFSLLQCQIDAWEKQENFGKISFHSVDIDGNDPNDDTCGICGDGGDLICCDGCPSTFHQSCLGIQMLPPGDWHCPNCTCKFCGLASATTDKEDDATVNALRTCDLCEKKYHDRCTKDTGALLANSNMPEHSFCGKSCKELFENLKKYLGTKHELDAGFTWCLVRRTDDDSEAASRGVTHRVECNSKLAVALTVMDECFLPVVDRRSGINIIHNSLYNSGSNFSRLNYTGFYTAILERGDEIISAASIRFHGTKLAEMPFIGTRHIYRHQGMCRRLFSAIELALCSLKVEKLVIPAISELVHTWTTVFGFTHLEESLRQEMRSLNMLVFPGIDMLQKLLAEQGKLEDAEQFENGDVGSIKPAVVNGLDIDSSALQHPHVSADARSNPAKKINNEISDASQDISNQGLAGRTVFSKSHSEERLSDSVSENCASPSNSSHGVLEKKNKIPMSSPINDPSPKCRLISPNDISTNGPPSDLSDCHEIPSLAQATACSDLGTVKNLVEPASEGKPHAFTDMKSDSPGLDRNPVSDSQVADNALSFKEFDMNDAHVEVLEAGPLVNSSQANNTEENNENVDVFGSVLNHAITDMNCDSPGLDQTPVSDSQVADNALSSKEFDMNDAQVEVLEASPLVNSSQANNTKENNENADDSGSVLNHAITDMNCDSPGLDQNPVSDSRVSDTALSSKEFDMNDAHVEVLEAGPLVNSSQANNTEENNENADVSGSVLNHAITDMSCDSPGLGQNPVSDTALSSKEFDMNDAQVEVLEASPLVNSSQANNTDENNENADVSGSVLNHAITDMNCDSPGLDQNPLSGSRVAGNALVCKEFDMNDAHVEVLEAGPLVNSSQANNTKENNENADISGSVLNHAFTDMRSDSPGLERNSLLDSQVADNALPFKEFDMNDAHVEVLEAGPLVNSSQGNNTKENNENVDVSGSALDHASSDMNSNSPGLDQNPLVASQVADNALPFKEFDVNDARVEVLEAGPSVNSSEGNNAKENDENVDVSGSVLHHAGERSLQVRSDNGEIAYEGEKNSHLDTEVASNELHLDETGLYASGDGTETDQALNG* 1739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0722 1738 MobiDBLite consensus disorder prediction 213 241 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 483 500 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 474 577 - -
Mal1g0722 1738 PANTHER PHD FINGER FAMILY PROTEIN 1 1350 - -
Mal1g0722 1738 SMART PHD_3 752 811 IPR001965 -
Mal1g0722 1738 SMART PHD_3 710 751 IPR001965 -
Mal1g0722 1738 Pfam PHD-finger 711 753 IPR019787 -
Mal1g0722 1738 Pfam Tify domain binding domain 633 683 IPR032308 -
Mal1g0722 1738 ProSitePatterns Zinc finger PHD-type signature. 711 750 IPR019786 -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 1300 1320 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 517 561 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 357 371 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 1175 1203 - -
Mal1g0722 1738 SUPERFAMILY FYVE/PHD zinc finger 700 756 IPR011011 -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 261 280 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 1097 1113 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 1586 1623 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 372 390 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 1085 1147 - -
Mal1g0722 1738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 699 771 IPR013083 -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 202 390 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 296 342 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 25 77 - -
Mal1g0722 1738 MobiDBLite consensus disorder prediction 281 295 - -
Mal1g0722 1738 ProSiteProfiles Zinc finger PHD-type profile. 708 753 IPR019787 -
Mal1g0722 1738 CDD PHD2_CHD_II 711 750 - -
Mal1g0722 1738 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 1 1350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0722 Mal-Chr1 8354560 8362066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0722 4 1073 PHD Transcription Factor Family AT4G14920 48.592 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal1g0722 TDBD 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0722 - - mtr:MTR_1g103830 2695.61