Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal1g0689 | ATGAATGAAGCATGTGCGTTTCTAATGGAAGTAAAAGATGTGTTTCAAGACGAGATGGAAAAGTATGATGAATTTTTAGAACTTCTAAAAGATTTCAAAGCCCAAAGAATTGATAGAGGAGCTGTGAAAGAAGGAGTGAGGGAGTTGTTTAAAGAGAATCAAGATTTGATTTCCAGATTCAACATCTTCTTGCCACCAGGGCATGAAATCTCACTTCCACTAGCTGATGAACAACAACGTGATGGATCCGCGATCAAAGATAAACCCTTGTTTGGTGATGCAGTGGCGTTTATAAAGGATGTAAAAGTTGTGTTTCAAGATAAGAGGGAAAAGTTTGATAAATTTTTAAAACTCCTACATGATTTCAGTGCCAAAAGAATTAATAGAAGAGTTGCCAAAGAAGGAATGATGGAGTTGTTTAAAGAGCATCAAGATTTAATTTCAAGATTCAACATCTTCTTGCCACCAGGACATGAAATCTCACTTCCATTGGATGATGATCAACAACAAGGTGATGGATTGGCACTCAAAGATGAACAGAAAGATGATGAACTTCAAGGTAATGGATCCGCACTCAAAGATGAATCAGCATTGGCACTCAAAGATGAAAAACAAGGTGATGTATCAGTGCTCAAAGATGAACAGAAAGATGATGAACTTCAAGTTGATGGATTGGCACTCAAAGATGAACAAAAAGATGATGAAGAATAA | 711 | 0.3657 | MNEACAFLMEVKDVFQDEMEKYDEFLELLKDFKAQRIDRGAVKEGVRELFKENQDLISRFNIFLPPGHEISLPLADEQQRDGSAIKDKPLFGDAVAFIKDVKVVFQDKREKFDKFLKLLHDFSAKRINRRVAKEGMMELFKEHQDLISRFNIFLPPGHEISLPLDDDQQQGDGLALKDEQKDDELQGNGSALKDESALALKDEKQGDVSVLKDEQKDDELQVDGLALKDEQKDDEE* | 237 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal1g0689 | 236 | Pfam | Paired amphipathic helix repeat | 110 | 154 | IPR003822 | GO:0006355 | |
Mal1g0689 | 236 | Pfam | Paired amphipathic helix repeat | 20 | 64 | IPR003822 | GO:0006355 | |
Mal1g0689 | 236 | MobiDBLite | consensus disorder prediction | 203 | 229 | - | - | |
Mal1g0689 | 236 | ProSiteProfiles | PAH domain profile. | 88 | 157 | IPR003822 | GO:0006355 | |
Mal1g0689 | 236 | PANTHER | PROTEIN, PUTATIVE-RELATED | 2 | 79 | - | - | |
Mal1g0689 | 236 | PANTHER | PROTEIN, PUTATIVE-RELATED | 87 | 170 | - | - | |
Mal1g0689 | 236 | SUPERFAMILY | PAH2 domain | 1 | 66 | IPR036600 | GO:0006355 | |
Mal1g0689 | 236 | MobiDBLite | consensus disorder prediction | 179 | 198 | - | - | |
Mal1g0689 | 236 | MobiDBLite | consensus disorder prediction | 203 | 236 | - | - | |
Mal1g0689 | 236 | SUPERFAMILY | PAH2 domain | 85 | 156 | IPR036600 | GO:0006355 | |
Mal1g0689 | 236 | PANTHER | SIN3B-RELATED | 2 | 79 | IPR039774 | GO:0003714 | |
Mal1g0689 | 236 | PANTHER | SIN3B-RELATED | 87 | 170 | IPR039774 | GO:0003714 | |
Mal1g0689 | 236 | Gene3D | Paired amphipathic helix | 93 | 155 | IPR036600 | GO:0006355 | |
Mal1g0689 | 236 | Gene3D | Paired amphipathic helix | 3 | 65 | IPR036600 | GO:0006355 | |
Mal1g0689 | 236 | ProSiteProfiles | PAH domain profile. | 1 | 67 | IPR003822 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal1g0689 | Mal-Chr1 | 7867686 | 7868396 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal1g0689 | 3 | 77 | WRKY Transcription Factor Family | AT4G12020 | 40.000 | 2.59e-09 | 55.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Mal1g0689 | PAH | 1.5e-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal1g0689 | K11644 | - | mtr:MTR_1g104960 | 199.904 |