Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0688 ATGGTAACTTTAATATGTGATATGTGTTTTTTTATTGCTCACTCATTTGTATTTTATATATTCTCTTTCACAGTGAAATTGAATGATAACACTGAGCATGAATTAGTCTTAGAAGACACAGTCCCATATGTTGGCATGAAGTTTGATACAGAAGATCATGCATACAAATATTATAATATGTATGCTGGCTTTGTTGGTTTTAGCGTTAGAAAAGATTGGATAAATAAAAGCAAATTAGATAAGGAGATTGTAATATCTCGAAAATTTGTTTGTTTTAAAGAAGGCTTTAAGAGGATGAAAGATGAAGAAGGAAAGATGACTCGCAAAGATTCCAGAACTGGTTGTTTAGCGCATATGGTCATTGGTCGAGAATCCGGTGGAAAATATGTTGTTACATCTTTTGTTAAAGACCATAACCATGAGTTTGCAACTCCGAAGAGTAAGCATAAATTACCATCACAAAGGAAGGTTTCTGGGGCACAAGCTGCTGAGGTTGAAATGGCAAACCGATCTGGCATTAGACAAAAATTAATTTTCGAGTTTTTAAGTCGACAGGCTGGAGGAAGAGAGAATGTTGGTTGCACTGCTAAAGACATTAGCAACCATTTAAGTTCTAAGAGGATGAAGGAAATGGAAGAAGGTGAGGCATTTACTCTTCTTCATTATTTTAAATTAAAGCAAACAGAGAATAAATCATTCTTTTATGAAATTCAACTTGATGTTGACAATCAGATAACTAACATTTTTTGGGCTGATGCTAAAATGGTTGTGGATTATTCGTATTTTGGAGATGTAGTGTGTTTTGATACCACTTATCGCACTAATAAGAATTTACGACCATTTGCTCCATTTATTGGATTTAACCATCATCGAGAAAGTGCGATGTGTGGTAAACAACCAAAGACAATTTTCACAGATCAAGATGCTGCAATGGCCAAAGCGATTTCAAATGTTTTTCCTAAATCATATCATCGTTTATGCTTGTGGCATCTATTCCAAAATGCACTTAAGAATGTTAATCATGCCTTTAAGAGATCAAATTGTTTTGCTGGAGATTTGCAAAGTTGCATTCATGATTTTGAGTATGAGGATGACTTTCTTAATGCTTGGGAGTCATTACTTGAAAAGCATAACCTTTGCCAAAATAAATGGATGCAAGAATTCTTTAAGAAAAAGGAAAAATGGGCTTCCGTATATGGGCGACACACATTTTCAGCAGGTACTACAACGACACAATTAAGTGAGAGTTTTAATGGTCGTTTAAGGCTTTACATGAAGCCTACCTTAAATGTGTTAGAATTTTTCAGAAACTTTGATAGATTGTTAGAAGACATGAGATACAAGGAGATTGATTCTAACTATGAGATGAGTCAGAAGATGCCATCATTGAATATGAATATCATGCTGTTAAAAAATGCGAGAGATGTCTATACACCAGCAATTTTTTCTCTAGTTCGTAGAGAATATGAAAAATCTTGTAACCTTCTTTTGAAAAGTTGCACCCAAAACTTATTGTTATATGAATATGAAGTGTGTTTGTTTGGGGATACAAGGCAGCATAGAGTTACCTTCAACTCTGAAGATCAAAGTGTTGAGTGCAGCTGCCAACTTTTTCAATTTCTGGGTATTCTTTGCTGTCATGCTCTTCGAGTATTCAATCATTTGAATATAATTATTATCCCCCCAAAATACATACTAAAGAGATGGACCAAGCAGGCTCGAAGTGGATGTGTTCTTGACAATAATGGACAAATTATCAAAGAAGATCCTAAGTTAATTGTCTTAAATCGCTATAAGGATTTGTGTCGCACTTCCATAGAGATATCAGGTAAGGCTGCTGAATGTGGAGATGCATCATCATTTCTTGCAAGAAAATTGGTGGAAATTGGCATTGAAGTTGATAAAATTTTGAGTAAAACATCTTCCACACAGAGTACAGATCATGTTGATATTATTTGTCAAACAAATGATGTTAGAATTGATGTCACCACAACTGTTTCAAATGAAAATTCTAATGTATCTCAAGCCATGGGTATAAAAAAGAAAGTTGGTGTATCAAGAGTGAAAGGTAGACCCAAGAGTTGTGTGGAAAAAAATTATAGAAGAAGCAAAAAAACAATCACAAACACTCACACGCATAGTCCTGTGAGACAGAAGTTTACTTCCACGAGGCCGATTCCAATTCTACAGGTCTAG 2196 0.3474 MVTLICDMCFFIAHSFVFYIFSFTVKLNDNTEHELVLEDTVPYVGMKFDTEDHAYKYYNMYAGFVGFSVRKDWINKSKLDKEIVISRKFVCFKEGFKRMKDEEGKMTRKDSRTGCLAHMVIGRESGGKYVVTSFVKDHNHEFATPKSKHKLPSQRKVSGAQAAEVEMANRSGIRQKLIFEFLSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAFTLLHYFKLKQTENKSFFYEIQLDVDNQITNIFWADAKMVVDYSYFGDVVCFDTTYRTNKNLRPFAPFIGFNHHRESAMCGKQPKTIFTDQDAAMAKAISNVFPKSYHRLCLWHLFQNALKNVNHAFKRSNCFAGDLQSCIHDFEYEDDFLNAWESLLEKHNLCQNKWMQEFFKKKEKWASVYGRHTFSAGTTTTQLSESFNGRLRLYMKPTLNVLEFFRNFDRLLEDMRYKEIDSNYEMSQKMPSLNMNIMLLKNARDVYTPAIFSLVRREYEKSCNLLLKSCTQNLLLYEYEVCLFGDTRQHRVTFNSEDQSVECSCQLFQFLGILCCHALRVFNHLNIIIIPPKYILKRWTKQARSGCVLDNNGQIIKEDPKLIVLNRYKDLCRTSIEISGKAAECGDASSFLARKLVEIGIEVDKILSKTSSTQSTDHVDIICQTNDVRIDVTTTVSNENSNVSQAMGIKKKVGVSRVKGRPKSCVEKNYRRSKKTITNTHTHSPVRQKFTSTRPIPILQV* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0688 731 MobiDBLite consensus disorder prediction 704 724 - -
Mal1g0688 731 Pfam MULE transposase domain 295 334 IPR018289 -
Mal1g0688 731 Pfam FAR1 DNA-binding domain 56 143 IPR004330 -
Mal1g0688 731 MobiDBLite consensus disorder prediction 709 724 - -
Mal1g0688 731 SMART 26again6 531 558 IPR006564 GO:0008270
Mal1g0688 731 ProSiteProfiles Zinc finger SWIM-type profile. 520 556 IPR007527 GO:0008270
Mal1g0688 731 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 37 292 - -
Mal1g0688 731 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 292 IPR031052 GO:0006355
Mal1g0688 731 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 293 643 IPR031052 GO:0006355
Mal1g0688 731 Pfam SWIM zinc finger 533 556 IPR007527 GO:0008270
Mal1g0688 731 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 293 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0688 Mal-Chr1 7854860 7857130 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g0688 FAR1 9.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0688 - K17604 qsu:112016759 835.869