Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0685 ATGTTTCGCGTTAGGATGATTTCTTCATTCCGCCAAGCCTACAAATCCGCGCTTGCTAATAATGCTCGAATTTCCGGAGTTATCGGAGTTGGAGGACATTTTGGAACTGATGTTAATCTCAACAACTGGATCAAGGCATCTACATATTCTACATCATCATTTCCTGCTTCAGGTTTTCCTGTTGAATTTATGAAGGAAGAAACAGCATCCAATTCCAATGAGATGAACAGCTCTGAAAAAATAGACCAGGCCTCGATTCGGAAAGAAGTGGCGTTTGTAATGGAAGTAGAAGATGTGCTTCATGATGAGTGGGAAAAGTATGAAGAGTTTTTAATACTCATGAGTGCTTACCGTAACGATAGAATTGATTTAAGAGCTTTGAAAGAAGGATTGATGGCGTTGTTTAAAGATCATAAAGATTTAATTGCGAGATTCAAGTTGCCCCCGGGAGAAATCCCACTTCCATTGGATGATGATGAACAACAAGTTTGA 492 0.3943 MFRVRMISSFRQAYKSALANNARISGVIGVGGHFGTDVNLNNWIKASTYSTSSFPASGFPVEFMKEETASNSNEMNSSEKIDQASIRKEVAFVMEVEDVLHDEWEKYEEFLILMSAYRNDRIDLRALKEGLMALFKDHKDLIARFKLPPGEIPLPLDDDEQQV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0685 163 Gene3D Paired amphipathic helix 89 148 IPR036600 GO:0006355
Mal1g0685 163 PANTHER PROTEIN, PUTATIVE-RELATED 73 160 - -
Mal1g0685 163 SUPERFAMILY PAH2 domain 82 146 IPR036600 GO:0006355
Mal1g0685 163 PANTHER SIN3B-RELATED 73 160 IPR039774 GO:0003714
Mal1g0685 163 ProSiteProfiles PAH domain profile. 82 152 IPR003822 GO:0006355
Mal1g0685 163 Pfam Paired amphipathic helix repeat 105 146 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0685 Mal-Chr1 7846633 7848453 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0685 PAH 8.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0685 - K11644 mtr:MTR_1g104940 74.7146