Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal1g0682 | ATGGAGTTGTTTAAAGAGCATCAAGATTTTATTTCAAGATTCAACATCTTCTTGCCACGAGGCCGTAAATTCTCACTTCCACTAGATGATCATGAACAACAAGGTGATGAAACCGCGCTCAAAGATGATTCACCATTCAAAGATGAAGCGTTGGAGTTTTTACTAGCAGTTAAAGCTGCATTTCAAGATAAGAAGGAAAAGTATGATAAATTCTTGAAAATCCTAAAGGATTATGGTGCCAAAAGAATTGGTGTAAGAGTTGTCAAAGAAGGAATGATGGAGTTGTTTAAAGAGCATCAAGACTTTATTTCCAGATTCAACTTCTTCTTGCCACCGAGATATAAAATCTCACTTCCATTAGATGGTGATGAAAAACAAGGTGATGGATCAACACTCACAGATATTGCAAAGTCGTTTGTAAATGCAGTGAAAGTTGCATTTCAAGATAAGATGGAAAAGTATAATGAATTCTTGAAACTCCTAGTTGATCGCAATGACAATAGAATTGATTTTAGAGTTTTCAAAGAAGGAATGATGGAGTTATTTAAAGAGCATAAGGATTTACTTTTGGGACTCAACCCCTTCTTGCCAGAGGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGATGGATTGGCGGCATTCAAGGATGAACAGAAAGGTGATGAACAATGA | 687 | 0.3654 | MELFKEHQDFISRFNIFLPRGRKFSLPLDDHEQQGDETALKDDSPFKDEALEFLLAVKAAFQDKKEKYDKFLKILKDYGAKRIGVRVVKEGMMELFKEHQDFISRFNFFLPPRYKISLPLDGDEKQGDGSTLTDIAKSFVNAVKVAFQDKMEKYNEFLKLLVDRNDNRIDFRVFKEGMMELFKEHKDLLLGLNPFLPEGHKISLPLDGDEQQGDGLAAFKDEQKGDEQ* | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal1g0682 | 228 | PANTHER | SIN3B-RELATED | 43 | 175 | IPR039774 | GO:0003714 | |
Mal1g0682 | 228 | ProSiteProfiles | PAH domain profile. | 40 | 113 | IPR003822 | GO:0006355 | |
Mal1g0682 | 228 | SUPERFAMILY | PAH2 domain | 43 | 112 | IPR036600 | GO:0006355 | |
Mal1g0682 | 228 | SUPERFAMILY | PAH2 domain | 136 | 199 | IPR036600 | GO:0006355 | |
Mal1g0682 | 228 | MobiDBLite | consensus disorder prediction | 214 | 228 | - | - | |
Mal1g0682 | 228 | ProSiteProfiles | PAH domain profile. | 129 | 199 | IPR003822 | GO:0006355 | |
Mal1g0682 | 228 | Pfam | Paired amphipathic helix repeat | 66 | 110 | IPR003822 | GO:0006355 | |
Mal1g0682 | 228 | Gene3D | Paired amphipathic helix | 136 | 197 | IPR036600 | GO:0006355 | |
Mal1g0682 | 228 | Gene3D | Paired amphipathic helix | 49 | 111 | IPR036600 | GO:0006355 | |
Mal1g0682 | 228 | PANTHER | SIN3B-RELATED | 165 | 212 | IPR039774 | GO:0003714 | |
Mal1g0682 | 228 | PANTHER | SIN3B-RELATED | 1 | 83 | IPR039774 | GO:0003714 | |
Mal1g0682 | 228 | PANTHER | PROTEIN, PUTATIVE-RELATED | 165 | 212 | - | - | |
Mal1g0682 | 228 | PANTHER | PROTEIN, PUTATIVE-RELATED | 43 | 175 | - | - | |
Mal1g0682 | 228 | PANTHER | PROTEIN, PUTATIVE-RELATED | 1 | 83 | - | - | |
Mal1g0682 | 228 | MobiDBLite | consensus disorder prediction | 206 | 228 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal1g0682 | Mal-Chr1 | 7835821 | 7836507 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal1g0682 | 119 | 207 | WRKY Transcription Factor Family | AT4G12020 | 37.778 | 6.61e-08 | 50.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Mal1g0682 | PAH | 1.5e-08 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal1g0682 | K11644 | - | mtr:MTR_1g104960 | 210.69 |