Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0681 ATGGCTTCTCTGAAAGAACATAACACAAGAGCTATGGCTTCTTCTTCCTCCTCTCACGGCGCTTCTCTGAAGAAATATGATGTTTTCATCAGCTTTCGAGGTGACGACACACGTGCTGGTTTCACAAGCCATCTTCACACTGCTTTGTGCCGAACCAAGTTTCATACCTACATAGACTACAGGATCGAGAAAGGAGATGAAGTTTGGTCTGAACTTGTGAAAGCAATCAAAGAATCCACTCTGTTTCTTGTTGTGTTCTCAGAGAATTACGCATCTTCAACATGGTGTTTGAACGAACTCGTTCAAATAATGGACTGTAGTAACCAAGATGAAGAAGAAGACAACGTTGTTGTTATTCCTGTGTTCTACCATGTTGACCCTTCAAATGTTAGGAAGCAGATTGGGAGTTACGGCACTGCCTTGGCAAAACATAAGAAGCAAGGCAACAATGATGATAAGATGCTGCAAAATTGGAAGAATGCTCTTTTTCAAGCAGCTAATTTATCTGGATTCCATTCTACCACATACAGGACTGAATCTGACTTGATTGAAGACATTATCAGAGTTGTATTAGGAAAATTAAATCACATGTACACAAATGAACTTACATCTAGTTTCATACTCAATGAAAACTACTGGAGCGTTAAATCTTTAATAAAAATTGATTCATCAGAAGTTCAAATCATTGGAGTTTGGGGCATGGGGGGCACAGGCAAGACAAGCCTTGCTGCTGCCATGTTTCAAAGAGTCTCTTTTCAGTATGAAGGCAATTGTTTCTTAGAAAATGTGACAGAAGAATCAAAAAGGCATGGAATCAATGGTACATGCAACAAACTTCTTTCCAAGTTACTAAGGGAAGATCTTGATATTGACACTCCCAAAGTAATACCATCCATGATCAAGAGAAGACTCAAACGCATGAAATCTTTCATTGTACTAGATGATGTACATACCTCAGAACTTCTGCAAAACTTGATTGGAGTGGGACATGGTTGGTTAGGAGCTGGTAGCACAGTCATTGTGACGACTAGGGATAAGCATGTGCTGATAAGTGGAGGAATTGACAAAATTTATGAAGTTAAGAAGATGAACTCCCAAAATTCCCTCCAGCTTTTCTGCTTGAATGCTTTTGACAATGTCTTGCCTAAGGAGGGATTTGTGGAGCTCTCAAAAAGAGCAATTGATTACGCCCAAGGCAACCCTTTGGCTCTGAAAGTTTTGGGATCATCTCTTCGTTGCAAAAGTGAAATAGAATGGAATTGTGCACTAGCTAAACTGAAGAAAATTTCGAGTGCCGAAATTGATAGGATACTGAGATGGAGTTATAATGAATTGGATGATAAAGAGAAAAATATATTTCTGGACATTGCATGCTTTTTCAAAGGGCATGAAAGGAATAGCCTAACAAAAATATTAAATGAGTGTGGTTTCTTTGCTGATATAGGGATAAGTCATCTTTTAGACAAGGCTCTTATAATAGTTGATTTTAAAAATTGCATACAAATGCATGACTTGATACAGGAAATGGGAAAACAAATTGTTCGTGAAGAATCTCTTAAGAATCCTGGACAACGCAGTAGATTATGTGATCCTAAAGAAGTTTGTGATGTATTGAAAAATAATAGAGGATCTGAGATTGTTGAAGCCATATTTTTAGATGCCACCGAATATACTTAG 1677 0.3798 MASLKEHNTRAMASSSSSHGASLKKYDVFISFRGDDTRAGFTSHLHTALCRTKFHTYIDYRIEKGDEVWSELVKAIKESTLFLVVFSENYASSTWCLNELVQIMDCSNQDEEEDNVVVIPVFYHVDPSNVRKQIGSYGTALAKHKKQGNNDDKMLQNWKNALFQAANLSGFHSTTYRTESDLIEDIIRVVLGKLNHMYTNELTSSFILNENYWSVKSLIKIDSSEVQIIGVWGMGGTGKTSLAAAMFQRVSFQYEGNCFLENVTEESKRHGINGTCNKLLSKLLREDLDIDTPKVIPSMIKRRLKRMKSFIVLDDVHTSELLQNLIGVGHGWLGAGSTVIVTTRDKHVLISGGIDKIYEVKKMNSQNSLQLFCLNAFDNVLPKEGFVELSKRAIDYAQGNPLALKVLGSSLRCKSEIEWNCALAKLKKISSAEIDRILRWSYNELDDKEKNIFLDIACFFKGHERNSLTKILNECGFFADIGISHLLDKALIIVDFKNCIQMHDLIQEMGKQIVREESLKNPGQRSRLCDPKEVCDVLKNNRGSEIVEAIFLDATEYT* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0681 558 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 549 - -
Mal1g0681 558 Gene3D - 201 352 IPR027417 -
Mal1g0681 558 Pfam NB-ARC domain 217 444 IPR002182 GO:0043531
Mal1g0681 558 PRINTS Disease resistance protein signature 303 317 - -
Mal1g0681 558 PRINTS Disease resistance protein signature 228 243 - -
Mal1g0681 558 PRINTS Disease resistance protein signature 397 411 - -
Mal1g0681 558 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 171 IPR035897 -
Mal1g0681 558 Gene3D - 362 446 IPR042197 -
Mal1g0681 558 Gene3D - 22 200 IPR035897 -
Mal1g0681 558 SMART till_3 25 168 IPR000157 GO:0007165
Mal1g0681 558 ProSiteProfiles TIR domain profile. 24 194 IPR000157 GO:0007165
Mal1g0681 558 Pfam TIR domain 25 201 IPR000157 GO:0007165
Mal1g0681 558 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 549 IPR044974 GO:0006952
Mal1g0681 558 SUPERFAMILY "Winged helix" DNA-binding domain 433 539 IPR036390 -
Mal1g0681 558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 456 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0681 Mal-Chr1 7830548 7832754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0681 5 553 WRKY Transcription Factor Family AT4G12020 29.946 2.79e-68 238