Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0679 ATGGAGTTGTTTCAAGAACATCAAGATTTAATTTCAAGATTCAACATCTTCTTGCCACAAGGACAAGAAATATCACTTCCATTGGATGATGATCAACAAGGTGATGGATTAGCGCTCAAAGATGAATCACCATCCTTAGATAAAGCAGTTTCGTTTTTAACAGCAGTTAAAGTTGCATCTCAAGATAAGAAGGAAATGTATAATGAATTCTTGAAACTCCTAAAAGATTACAGTGCCAAAAGAATTAACAGAAGAGCTGTCAAAGAAGGAGCTATGGAGTTGTTTAAAGAGCATCAAGAATTACTTTTGGGACTCAACACCTTTCCAGCGGAACACTAA 339 0.3569 MELFQEHQDLISRFNIFLPQGQEISLPLDDDQQGDGLALKDESPSLDKAVSFLTAVKVASQDKKEMYNEFLKLLKDYSAKRINRRAVKEGAMELFKEHQELLLGLNTFPAEH* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0679 112 PANTHER PROTEIN, PUTATIVE-RELATED 1 108 - -
Mal1g0679 112 Gene3D Paired amphipathic helix 48 109 IPR036600 GO:0006355
Mal1g0679 112 SUPERFAMILY PAH2 domain 41 108 IPR036600 GO:0006355
Mal1g0679 112 PANTHER SIN3B-RELATED 1 108 IPR039774 GO:0003714
Mal1g0679 112 Pfam Paired amphipathic helix repeat 65 108 IPR003822 GO:0006355
Mal1g0679 112 ProSiteProfiles PAH domain profile. 42 112 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0679 Mal-Chr1 7826080 7826418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0679 49 108 WRKY Transcription Factor Family AT4G12020 38.333 6.20e-06 42.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0679 PAH 3.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0679 - K11644 mtr:MTR_1g104960 119.012