Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0678 ATGAAGGATAACAATGGTAATGCTGGTCAAAAACTACTAAGCATGGAGGAAGTATCATCGTTTATAAATGATGTAAAAGTTGAGTTTCAAGATAAGATGGAAAAGTATGATGAGTTTGTGAAAGTCTTGTACGATTTCAAGGCTCTAAGAATTGATAAAGAAAGTGCCACAGCAAAAGTGGAGGAGTTGTTTAAAGGGCATTCAGATTTAATTTTGAAATTCAACTCCTTGACGCTAAACGGATATCAAATCACTAATGATGATCGTAAGGACACTAAAGCAAAACATGACATCGAACAGGATCAAATAGGGTCCGATATAATTGACAAATTTGAACAAATGCGTGACAAATTTGAGAAATTTGAGTCGAAAATGATTGGCAAAATCGATCAAATAACGTTGAGCGCTCAACATTCGTCTAAAACAATATTAGACATTGTCGAGCACGGGAAGAAGCACATATAA 465 0.3484 MKDNNGNAGQKLLSMEEVSSFINDVKVEFQDKMEKYDEFVKVLYDFKALRIDKESATAKVEELFKGHSDLILKFNSLTLNGYQITNDDRKDTKAKHDIEQDQIGSDIIDKFEQMRDKFEKFESKMIGKIDQITLSAQHSSKTILDIVEHGKKHI* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0678 154 PANTHER PROTEIN, PUTATIVE-RELATED 10 122 - -
Mal1g0678 154 SUPERFAMILY PAH2 domain 14 76 IPR036600 GO:0006355
Mal1g0678 154 PANTHER SIN3B-RELATED 10 122 IPR039774 GO:0003714
Mal1g0678 154 Gene3D Paired amphipathic helix 18 77 IPR036600 GO:0006355
Mal1g0678 154 ProSiteProfiles PAH domain profile. 11 81 IPR003822 GO:0006355
Mal1g0678 154 Pfam Paired amphipathic helix repeat 34 75 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0678 Mal-Chr1 7824254 7824718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0678 3 112 WRKY Transcription Factor Family AT4G12020 34.545 9.97e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0678 PAH 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0678 K11644 - mtr:MTR_1g105010 106.686