Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0677 ATGGATAACGGTGGTCAGAAAGTACTAACCATGGAAGAAGCAATAGCGTTTGTAAGTGATGTAAAAGTTAAGTTTCAAGATAAGAGGGAAAAATATGATGAATTTTTGAAAGTCCTGGGTGATTATAGGGCTGAAAAAATTGATATAGCTGGTGTCACAACAAGGATGGAGGAGCTGTTTGAAGGGCATTCAGATTTAATTTTGAAATTCAAATCCTTTACGCCAAATGGATCTCAAATCAGTGATGACACCGAAGAAGAAAAGGAAGAAGACACTGAACAGAACCAACGTGAGGAGGAGAAGAAGCAAGTATAA 315 0.3746 MDNGGQKVLTMEEAIAFVSDVKVKFQDKREKYDEFLKVLGDYRAEKIDIAGVTTRMEELFEGHSDLILKFKSFTPNGSQISDDTEEEKEEDTEQNQREEEKKQV* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0677 104 SUPERFAMILY PAH2 domain 9 76 IPR036600 GO:0006355
Mal1g0677 104 Coils Coil 81 101 - -
Mal1g0677 104 Pfam Paired amphipathic helix repeat 30 73 IPR003822 GO:0006355
Mal1g0677 104 ProSiteProfiles PAH domain profile. 7 77 IPR003822 GO:0006355
Mal1g0677 104 PANTHER PROTEIN, PUTATIVE-RELATED 6 92 - -
Mal1g0677 104 MobiDBLite consensus disorder prediction 73 104 - -
Mal1g0677 104 Gene3D Paired amphipathic helix 13 75 IPR036600 GO:0006355
Mal1g0677 104 PANTHER SIN3B-RELATED 6 92 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0677 Mal-Chr1 7814336 7814736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0677 1 87 WRKY Transcription Factor Family AT4G12020 38.636 1.92e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0677 PAH 1.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0677 K11644 - mtr:MTR_1g105010 138.272