Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0663 ATGGCGCAACAACAAGCATCATCATCTTCATCCTCACTCCTTAGTCCTGACGCCGTAGACGATTTTTACTTCTCTGTTGTCTCCGACCATGAAATTGACCCTAACCTCCCTGTCTCCGATGACAAGTACGCTGAAGCATTACAGTTTCAAGAAACCTTAATGGCCTCTCTCATCACTTCTCACCAAAACTCTTCCTTTTCCGCCACATCGCCACCGCCATTGTCGAATGAAGAGATGTTTAGGAATCAAATATGTTACCATTCATTTTGTTCTGAATGTGTTGTGAAACAAGTGGCAACAAAAATCCAAGATAACATAACCGTTGTTTCTTGTACTGGTTTGAACTGCAAGGGTGTGTTGGAGGTTGAATCTTGCAGGACATTGCTTCCCACAGAGTTGATTGATAAGTGGAATGATGCATTGTGTGAGGCTTTTTTTCTTACTGTTCCTAAATTATATTGCCCCTTTAAGGATTGTTCTGCAATGTTGCTTGATGAAATTGAAGGAAGAGAAGATGTCAGGGAATCCGAGTGTCCTTTTTGTCATAGATTGTTTTGTGCAAGGTGTCATGTTCCTTGGCATCCTGGGGTTGGTTGTGAGGAGTATCAGACGTTGAATGTGGATGAAAGAGGGAGTGAAGATCTGCTTGTTAGGGAGCTTGCTAATCAGAAGAAGTGGAAAAGGTGTCCAAGATGCAGGTTCTATGTTGAAAAAAGGGATGGATGTTTGCACATTACGTGCAGGTGCAAATATGAGTTTTGCTATGCTTGCGGAGCACAATGGACATCTTCTCATGGTGGTTGTCAAAGAAATTAG 816 0.4228 MAQQQASSSSSSLLSPDAVDDFYFSVVSDHEIDPNLPVSDDKYAEALQFQETLMASLITSHQNSSFSATSPPPLSNEEMFRNQICYHSFCSECVVKQVATKIQDNITVVSCTGLNCKGVLEVESCRTLLPTELIDKWNDALCEAFFLTVPKLYCPFKDCSAMLLDEIEGREDVRESECPFCHRLFCARCHVPWHPGVGCEEYQTLNVDERGSEDLLVRELANQKKWKRCPRCRFYVEKRDGCLHITCRCKYEFCYACGAQWTSSHGGCQRN* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0663 271 SUPERFAMILY RING/U-box 138 204 - -
Mal1g0663 271 SUPERFAMILY RING/U-box 77 144 - -
Mal1g0663 271 SMART ibrneu5 209 268 IPR002867 -
Mal1g0663 271 SMART ibrneu5 135 199 IPR002867 -
Mal1g0663 271 Pfam IBR domain, a half RING-finger domain 218 268 IPR002867 -
Mal1g0663 271 Pfam IBR domain, a half RING-finger domain 151 199 IPR002867 -
Mal1g0663 271 SUPERFAMILY RING/U-box 210 269 - -
Mal1g0663 271 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 37 260 IPR031127 GO:0004842|GO:0016567
Mal1g0663 271 Gene3D - 196 271 - -
Mal1g0663 271 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 37 260 - -
Mal1g0663 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 145 IPR013083 -
Mal1g0663 271 ProSiteProfiles TRIAD supradomain profile. 60 271 IPR044066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0663 Mal-Chr1 7659623 7661041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0663 74 259 C3H Transcription Factor Family AT2G19610 30.412 3.21e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0663 K11975 - qsu:112001859 330.872