Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0645 ATGGCTTCCTTCCATTTGCTGTTTTTACTTGCAACTTTCTTTTCCCTCTTTGTCCATTGCTCTCCTTCTCCCATCATACAAGCTGCTGTTGATAATGGCACACATGCTCTTTACAACTGCACAAGGAACAGTGCAACCTCTAACGCTTACCGTTCCAACATCAAAACACTCCTAGATTTGCTCTCCTCCAATAGTAGTAACAATGCCAGATACTACAACGCCACAGTTGCAAGCGGTAACACTGTGGACACTGTCTACGGTCTCTTCCTTTGTGTAAGAGACATTGACCCCAAAATTTGCCGGTCATGCGTGATAGAAGCAGCCAAACTCATATCATCACTGTGCACCACAGCAAAAGAAGCCTTAGTTTGGTACACCGCATGCTATGTGCACTATTCTGATAGTCTCTTCTTTTCCACCGTGGAGAAAAGTCCAGAAATCTCTTTCATGAATGATAAGGATTATGAGGGTGACGTTGGGAGCTTCAACAACATTCTTTGGGATATGTTAAACGATTTGAGAAGGGAGACTAGAAATGCTTCTGCAAAATTGGCTGGCAAGTCAGTGAACCTCACAGAAAACCAAAAAATATATGGCTATGCTTGGTGCCTCCCATACCTATCTGCAGAGAACTGCAGCTGGTGTCTTAGTGATGCCATAGCTGAAGTTCCAACTAGGTGCTGCAGAGGAAAATCTGGAGGCAGAATATTATATCCCAGTTGTGGTGTTAGATTCGAATTATATCCATTCTACAAGGCAGACGGCAATAATTCTTGGGTGCTGCCTCCACCCACAATTCCTCGCTTTTCAGCTCCACCAGGAAAAGGAAAACAGAAGACACTAACTATATTTGAGATCGGTGTTCCAATTGTTGTTTCACTGATGCTGTTAGTCTTGGGATGTTATTTCTTTCTATATAGAAAAGAAACAAAGAATCAGCACGATATTCTCAAAGAAAGCTTTGGAAATGATGTTACCACTTTGGAATCGTTGCAATTTGAATTTGCAAAAATTGAAGCAGCAACAAACAGATTTGCTGCAGAAAACAGGATAGGCAAAGGTGGATTTGGAGAAGTCTACAAGGGAATTCTTTCAGATGGACAAGAAGTTGCTGTGAAGAGGCTTACAAGAAGCTCTGGACAAGGTGCAGTTGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACACAGAAATCTAGTGAGATTACTAGGATTTTGTTTGGAAGATGAAGAGAAGATACTTATCTATGAGTATGTGCCAAACAAGAGTCTTGATTACTTTTTATTTGATCCCCATAAGCGCAAACTGTTACCTTGGTCTCAACGTCAGAAGATCATCAAAGGAATTGCCCGAGGAATTCTTTATCTCCATGAAGATTCTCGCCTCAAAATAATACATCGTGATCTGAAACCAAGCAATGTCTTGTTAGATAGTAATATGAATCCAAAAATATCAGATTTTGGCATGGCTAGAATTGTATCTATAGATCAAATTGAAGAAAGTACATGCACGATTGTAGGGACATATGGTTATATATCTCCAGAATATGCAATGCACGGATACTTTTCAGTGAAATCAGATGTGTATAGTTTCGGAATCATGGTTCTAGAGATTATTAGTGGAAAGAGGAAAGGTTGTTCTGCTGAATCAGAGTGTGTTGATGACATCCGGAGATATGCTTGGACAAAATGGGCAGAGCAAACACCAATTGAACTAATGGATCCTAGTACAGAAGGAACTTATTCACATGAAGAAGTCATCAAATACATCCACATTGGTTTGTTATGTGTTCAGGAAAATCCAGATGATAGACCTACAATGGCAACAATTGCATTCTACCTTAACAGTCCTTCAATCAACTTGCCATCCCCTCTTGAACCAGCATATTTAAAACGTAGCGGAAATGAAGTAAACATGGCCCCCAACAAGGAATTGGATAATATCAATGATTCAACCAACGGAATCACTGTCACTCAATTCTTTCCTCGTTAA 1998 0.4004 MASFHLLFLLATFFSLFVHCSPSPIIQAAVDNGTHALYNCTRNSATSNAYRSNIKTLLDLLSSNSSNNARYYNATVASGNTVDTVYGLFLCVRDIDPKICRSCVIEAAKLISSLCTTAKEALVWYTACYVHYSDSLFFSTVEKSPEISFMNDKDYEGDVGSFNNILWDMLNDLRRETRNASAKLAGKSVNLTENQKIYGYAWCLPYLSAENCSWCLSDAIAEVPTRCCRGKSGGRILYPSCGVRFELYPFYKADGNNSWVLPPPTIPRFSAPPGKGKQKTLTIFEIGVPIVVSLMLLVLGCYFFLYRKETKNQHDILKESFGNDVTTLESLQFEFAKIEAATNRFAAENRIGKGGFGEVYKGILSDGQEVAVKRLTRSSGQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEDEEKILIYEYVPNKSLDYFLFDPHKRKLLPWSQRQKIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVSIDQIEESTCTIVGTYGYISPEYAMHGYFSVKSDVYSFGIMVLEIISGKRKGCSAESECVDDIRRYAWTKWAEQTPIELMDPSTEGTYSHEEVIKYIHIGLLCVQENPDDRPTMATIAFYLNSPSINLPSPLEPAYLKRSGNEVNMAPNKELDNINDSTNGITVTQFFPR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0645 665 Pfam Protein kinase domain 347 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0645 665 Gene3D Phosphorylase Kinase; domain 1 307 420 - -
Mal1g0645 665 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Mal1g0645 665 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Mal1g0645 665 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Mal1g0645 665 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 665 - -
Mal1g0645 665 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Mal1g0645 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Mal1g0645 665 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Mal1g0645 665 Gene3D Transferase(Phosphotransferase) domain 1 421 622 - -
Mal1g0645 665 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0645 665 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 665 - -
Mal1g0645 665 SMART serkin_6 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0645 665 Gene3D - 33 137 IPR038408 -
Mal1g0645 665 Gene3D - 146 250 IPR038408 -
Mal1g0645 665 SUPERFAMILY Protein kinase-like (PK-like) 331 633 IPR011009 -
Mal1g0645 665 CDD STKc_IRAK 351 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0645 Mal-Chr1 7492542 7496001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0645 12 635 Receptor kinase-like Gene Family AT4G05200 45.526 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal1g0645 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0645 - - mtr:MTR_1g105585 1036.94