Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0643 ATGGCCTCTTTCCAACCCTTCTTTCTCTTTATCCTTGTTTGCTTCATCAATTTTGTAACCACTAAAGCAAAGAACGATGATATTCCTTCTCCTTTGATGGATTGCTCAACAATCAACAAAACCACTCTAAATAGCACCTTCGAGTTGAATCTCAGGACCCTCCTCTCAGATTTATCTTCCAACGCTACTGCCAACAAAGAATTCTACAACACCAAAGTGACAGACAAAAACAACTCCTCCAACACAGTCTATGGTCAGTTTATGTGCAAGGGTGATGTTCCTGCTCATCTCTGTAGTCAGTGCGTCTCAAACTTGACCCGTTACAACTTATCCTCAGACCCATTTAACACTAATTGTTTCTTGTCCAAAGATGTGGTAATTAGGTACGAGGATTGCAAGGTCCGATATTCCAGCAAATCTTTCTTCTCCCCTACTCACTTTAGTTCAGGTTCTAGCACAAGCTCCTCTGTTAATGTGTCCAACCAGTCAGTATTCGAGCGTTTAGTTTTCAAAAACTTGAATGGTGTGGCAGATGAGGCAGCCAAATTTTCAATTGGCGTTAAAAAGTATGCCACAAAGGAAGCAATCATATCTGAATTTGAAACCCTTTATTTTCAAGCTCAGTGCACACCAGACCTGTCACCACAAGATTGCAGGAAATGTCTAAATGTTACCATAACGGATGTTCTTCAGAACAGTAAAAGTGACGATGCGATGGTAGGGAACTCTGAAACTTACAATTGTTATATCAGATATGATGTGTATCCTTTCTATCGCCCCAGTAATGCTCCAACCCCACAAGATCTCGTTCCAGCTTCCAATACAATTGTTTCAAAATACTCACAACATCCTGCTTTTCTTTCCCACAATTGTTCAAGCAATGAAACCATGAACAACAATTTTCTATCAAATCTCAGAACACTCTTCTCTTCATTGTCTTCCAATGCCATGAGAACCAGTTTCTTCAAGACAACTATCGACACAGTTAATGGCCTCTTCATGTGTCGCGGTGATATCTCCCTCTCCCCTACCATCTGTCAGTTATGTGTCCAAGATGCAACCAAAAGAATATCCTCGGAGTGTCCTACCTCCAAAGAGGCTATAATTTGGTACGATAAATGCTTACTCCGCTATTCCCATCATTCTCTCCTTTCAGGTATTGATACAAGTGCTCCAAAATTTCATCAATTCAATATGGCCAATGCTTCTAACCTGAACCAGCTTCAAAGCTTCACCACTTGGAAACTAGCAGCTACTTTATATGAAGTGGAGTATATCCAGACAGGGGAGAGTACTATTAAAAATTATGAAACAAAATCGGTAAAATTGAATGATCATCAAACCCTTCACACTCTTGTTCAATGTACGCCAGATTTGTCCGATGGAGATTGCAGCACCTGCCTGAAAAACATTTTCCAAAACGAAATTCCTTGGAGTAGTTTAGCAAGTCCAGAAGGAAATATTCTATATCCTAGCTGCTATATGATGTTTGGATTGTTCCAATTCTACAGCAATGATGTTAAACCGGAGGCGTTTGAGCAAGTTAGCCCTCCTCCAACAACTAAAGAAAATGAAAAAAGAAGGCCGCGAACGGTGATAGTTGTTGTCCCAATCATCGTTTTAACATTGCTTCTAACTTTTTTCTGCTATTTGCTAAGGGAAAGAGCAAGAAAGAGCAGTTACAAGACCTCAATTCTAAAAAACAATTTTGGTCATGAAAGTACCACTTTGGAGGGTTTACAATTCGAAATGGCCGTAATTAAAACAGCAACAAACAATTTTTCACATGAAAACAAGATTGGCGAAGGTGGATTTGGAGAAGTTTATAAGGGCATTCTTTCTGATGGACGACACATAGCTGTTAAGAGGCTTTCATCAAATTCAAAGCAAGGCATAGTTGAGTTCAAGAATGAAATTTTATTGATAGCCAAGTTACAACAAAGAAATCTTGTGGCATTAATAGGATTTTGCCTAGAAGAGCAAGAGAAGATTCTTATTTATGAATATGTGCCAAATGGGAGCCTTGATTACTTTTTATTTGATGCCCAACAACAAAAGTTAAGCTGGGATGAACGTTACAAAATTATAAAAGGGACGGCTTTAGGAATTCTTTATTTACATGAATATTCTCGTCTCAAAGTTATACATCGTGATCTCAAACCTAGTAATGTTCTATTAGATGAAAATATGAATCCTAAAATATCAGATTTTGGCATGGCTAGAATTGTTCAAATAGATCAAGATCGTGGACATACCAATAAAATTGCTGGAACATGGGGTTACATGTCCCCAGAGTATGCAATGCTTGGACAATTTTCGGAGAAGTCGGATGTTTTTAGTTTTGGTGTCATTGTTTTAGAGATTCTTACTGGAAAAAGAAATATAAATCCTTATGAACCACGTCATGTTACCGAAGGCCTCATAAGTTATGTATGGAGACAATGGAAAAATGAAACTCCATTGATCATATTGGATACAAAAATAGAAAATTATTCTCTTATTGAAGTTATTAAGTGCATACAGATTGGTTTGTTATGTGTTCAAGAAAATCCAAATGTCAGACCAACAATGGCAACAGTTGTTTCATACCTCAATAGTCATTCACCAGAATTGCCATCTCCACAAGAACCAGCATTTTTCATACACAATAGAATGAATCAAGAAGTAACAGCACAAATGGACTCAAGTTCTGTCAATAATTTTATATCATTTTCTGTCAACGAGATGTCTATAAGTGAATTTTATCCTCGACGGTAG 2757 0.3779 MASFQPFFLFILVCFINFVTTKAKNDDIPSPLMDCSTINKTTLNSTFELNLRTLLSDLSSNATANKEFYNTKVTDKNNSSNTVYGQFMCKGDVPAHLCSQCVSNLTRYNLSSDPFNTNCFLSKDVVIRYEDCKVRYSSKSFFSPTHFSSGSSTSSSVNVSNQSVFERLVFKNLNGVADEAAKFSIGVKKYATKEAIISEFETLYFQAQCTPDLSPQDCRKCLNVTITDVLQNSKSDDAMVGNSETYNCYIRYDVYPFYRPSNAPTPQDLVPASNTIVSKYSQHPAFLSHNCSSNETMNNNFLSNLRTLFSSLSSNAMRTSFFKTTIDTVNGLFMCRGDISLSPTICQLCVQDATKRISSECPTSKEAIIWYDKCLLRYSHHSLLSGIDTSAPKFHQFNMANASNLNQLQSFTTWKLAATLYEVEYIQTGESTIKNYETKSVKLNDHQTLHTLVQCTPDLSDGDCSTCLKNIFQNEIPWSSLASPEGNILYPSCYMMFGLFQFYSNDVKPEAFEQVSPPPTTKENEKRRPRTVIVVVPIIVLTLLLTFFCYLLRERARKSSYKTSILKNNFGHESTTLEGLQFEMAVIKTATNNFSHENKIGEGGFGEVYKGILSDGRHIAVKRLSSNSKQGIVEFKNEILLIAKLQQRNLVALIGFCLEEQEKILIYEYVPNGSLDYFLFDAQQQKLSWDERYKIIKGTALGILYLHEYSRLKVIHRDLKPSNVLLDENMNPKISDFGMARIVQIDQDRGHTNKIAGTWGYMSPEYAMLGQFSEKSDVFSFGVIVLEILTGKRNINPYEPRHVTEGLISYVWRQWKNETPLIILDTKIENYSLIEVIKCIQIGLLCVQENPNVRPTMATVVSYLNSHSPELPSPQEPAFFIHNRMNQEVTAQMDSSSVNNFISFSVNEMSISEFYPRR* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0643 918 ProSiteProfiles Gnk2-homologous domain profile. 283 383 IPR002902 -
Mal1g0643 918 Gene3D Phosphorylase Kinase; domain 1 555 669 - -
Mal1g0643 918 Gene3D Transferase(Phosphotransferase) domain 1 670 875 - -
Mal1g0643 918 Gene3D - 393 502 IPR038408 -
Mal1g0643 918 Gene3D - 148 257 IPR038408 -
Mal1g0643 918 Gene3D - 283 382 IPR038408 -
Mal1g0643 918 Gene3D - 32 141 IPR038408 -
Mal1g0643 918 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Mal1g0643 918 SUPERFAMILY Protein kinase-like (PK-like) 583 898 IPR011009 -
Mal1g0643 918 ProSiteProfiles Protein kinase domain profile. 594 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0643 918 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 518 908 - -
Mal1g0643 918 Pfam Salt stress response/antifungal 416 497 IPR002902 -
Mal1g0643 918 Pfam Salt stress response/antifungal 35 138 IPR002902 -
Mal1g0643 918 Pfam Salt stress response/antifungal 291 380 IPR002902 -
Mal1g0643 918 Pfam Salt stress response/antifungal 157 254 IPR002902 -
Mal1g0643 918 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 269 - -
Mal1g0643 918 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 280 507 - -
Mal1g0643 918 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 518 908 - -
Mal1g0643 918 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 29 269 - -
Mal1g0643 918 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 280 507 - -
Mal1g0643 918 CDD STKc_IRAK 600 865 - -
Mal1g0643 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Mal1g0643 918 ProSiteProfiles Gnk2-homologous domain profile. 147 257 IPR002902 -
Mal1g0643 918 ProSiteProfiles Gnk2-homologous domain profile. 29 141 IPR002902 -
Mal1g0643 918 SMART serkin_6 594 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0643 918 Pfam Protein tyrosine and serine/threonine kinase 597 863 IPR001245 GO:0004672|GO:0006468
Mal1g0643 918 ProSiteProfiles Gnk2-homologous domain profile. 396 502 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0643 Mal-Chr1 7465369 7469503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0643 276 917 Receptor kinase-like Gene Family AT4G05200 43.070 1.87e-170 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal1g0643 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0643 - - gmx:100785282 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0643 1 7465369 7469503 Mal6g0488 6 6207594 6211770 PCT