LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g0636	ATGATTTCTTCACAATGGCTTCTGTATTCACTTCTTCCTCTGTTTTTCACACTAAAATCCAAAGCCAACGACCAATTAATTTTGCGCTACTCCAAATGTAACGAAAATCTCGGAAATTTCACTGTGGGTAGTGTCTACGATAACAATCTTGGCCAAGTTCTAAAAAATATATATTCTAACAGAGAAATAAACTACGGATTCTACAATTTTTCGTACGGTAAAGTACCCAACCAAGTAAACGCAGTCGCACTCTGTAGAGGAGACATTAATCCAGAGGATTGTCGTGATTGTCTGAAAATTTCTGCAGCACTTCTCTTAGACCGGTGCCGAATAGAGAAAGAAGCAATTGGTTACTACGACTTGTGCACCTTACGCTATTCAAATGATTCAATTGTAAGTGACATGGAAACTGAAACCGGTTACGTTTATCATCTTGTAACCAAGACAATGGTGGATGATGCGTTTAATCAAACACTTAGTGACTTGCTGGATGAGCTGAAAAGCGCAGCGGCTGAAGGTGATTCGCACAAGAAGTTTGCTGAAAAGAGTGTCAAAGTAATTGATGAAACAAGTAGTAGTAGTAGTAATAGTAATGACACTATATATGGTATGGTCCAGTGTACACCAAATTTGTCTAAGGCAGGCTGTACTGCATGTTTGGATTCGGCGTTGGGACAGATTCCATTTTGGTGCAAAGAAATGAAAGGATGTTTGTATCTTGGACCAAGTTGTTCTGTCAGATATGACATATCTCCATTCTTTCAGTCCATAGTCAACAGTCCAGCACCACAACATTCTCAAGCACTTCCTCCGGTAATTTCTCCTACAACTGCACCTGTTAACTCCACCAACACATCTACTACTAGTAAAGGAAAGAGCAGGAAATTAAGAACAGCCACAGCTGTCGCTGTAGCAATCGTTGTGACTGGCCTACTAGCTGTGAGTATATGCATCTATTTAGGAAGTAGAAAACCAAGACCCGAATATACGGCTGAAATTGAAGGCCAAGAGAGAGAGGAATATGAAGATGAATCTGAAGCTGAAGCTGGTAATGATCTTAAAGTTGGCGATTTGTTGCAATTTGACTTTGCAACCATCAGATTAGCTACAAACAATTTCTCTGATGCAAATAAGCTTGGTCAAGGTGGATTTGGAACTGTTTATAAGGGTACACTCTCAGATGGACATGATATTGCTATCAAAAGGTTGACTAATAATTCTGAGCAAGGAGAAACAGAATTTAAGAATGAAGTGTTGCTGACAGGGAAGCTTCAACATCGAAATTTAGTTAATCTACTAGGTTTCTGTTTACAAAGAAGAGAAAGACTACTTATATATGAGTTTGTCTACAATAAAAGTCTTGATTATATCATATTTGATCCAATGAAGCGAGCAGTTTTGAATTGGGAAAGACGCTTCAAAATCATAAAAGATATTGCTCGTGGTCTTCTTTATCTTCATGAAGATTCTCGGTTACAAATTGTTCACCGTGATCTCAAAACAAGTAACATTCTACTAGATGAAGAGATGAACCCAAAAATTACAGATTTTGGCATTGCAAGATTATTTAACGCCAATCAAACTCATGGCATGACAAAGACCGTTGTTGGAACATATGGATATATGTCTCCAGAGTACATTAGACATGGGCAATTCTCAGTCAAGTCAGATGTGTTCAGTTTTGGTGTAATTGTTTTAGAAATTGTTTGTGGCCAAAGAAATATTGAGATTCGTGACGGGGAGAAAATAGAGGATCTATTAGGCATTGCATGGAAACATTGGAAAGCAGGGACAAGTTCAGATATTGTAGACCCAATTCTACACCAAGGATTTAGTAAGAATGAAAAAATGAGATGCATCCATGTTGGATTACTTTGTGTTCAAGAAGATATAGTTTTGAGACCAACAATGAGTTCTGTTTTACTAATGCTTAATAGCACTTCTTTCCCACTCCCTGAACCTTCGGAACCTCCATTTATAATGCAACCCAAAAGGGCATCATCTATACCATTATATGGCCACTATTCGGAATGGAAGTTTGAGAATGGAAGTGGCATCTGA	2061	0.3819	MISSQWLLYSLLPLFFTLKSKANDQLILRYSKCNENLGNFTVGSVYDNNLGQVLKNIYSNREINYGFYNFSYGKVPNQVNAVALCRGDINPEDCRDCLKISAALLLDRCRIEKEAIGYYDLCTLRYSNDSIVSDMETETGYVYHLVTKTMVDDAFNQTLSDLLDELKSAAAEGDSHKKFAEKSVKVIDETSSSSSNSNDTIYGMVQCTPNLSKAGCTACLDSALGQIPFWCKEMKGCLYLGPSCSVRYDISPFFQSIVNSPAPQHSQALPPVISPTTAPVNSTNTSTTSKGKSRKLRTATAVAVAIVVTGLLAVSICIYLGSRKPRPEYTAEIEGQEREEYEDESEAEAGNDLKVGDLLQFDFATIRLATNNFSDANKLGQGGFGTVYKGTLSDGHDIAIKRLTNNSEQGETEFKNEVLLTGKLQHRNLVNLLGFCLQRRERLLIYEFVYNKSLDYIIFDPMKRAVLNWERRFKIIKDIARGLLYLHEDSRLQIVHRDLKTSNILLDEEMNPKITDFGIARLFNANQTHGMTKTVVGTYGYMSPEYIRHGQFSVKSDVFSFGVIVLEIVCGQRNIEIRDGEKIEDLLGIAWKHWKAGTSSDIVDPILHQGFSKNEKMRCIHVGLLCVQEDIVLRPTMSSVLLMLNSTSFPLPEPSEPPFIMQPKRASSIPLYGHYSEWKFENGSGI*	687

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g0636	686	Gene3D	Phosphorylase Kinase; domain 1	334	448	-	-
	Mal1g0636	686	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	494	506	IPR008271	GO:0004672\|GO:0006468
	Mal1g0636	686	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	9	669	-	-
	Mal1g0636	686	Pfam	Protein kinase domain	374	587	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal1g0636	686	MobiDBLite	consensus disorder prediction	265	292	-	-
	Mal1g0636	686	ProSiteProfiles	Gnk2-homologous domain profile.	137	253	IPR002902	-
	Mal1g0636	686	Pfam	Salt stress response/antifungal	152	249	IPR002902	-
	Mal1g0636	686	Pfam	Salt stress response/antifungal	33	128	IPR002902	-
	Mal1g0636	686	ProSiteProfiles	Gnk2-homologous domain profile.	28	131	IPR002902	-
	Mal1g0636	686	ProSiteProfiles	Protein kinase domain profile.	373	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal1g0636	686	Gene3D	Transferase(Phosphotransferase) domain 1	450	649	-	-
	Mal1g0636	686	CDD	STKc_IRAK	379	645	-	-
	Mal1g0636	686	Gene3D	-	26	130	IPR038408	-
	Mal1g0636	686	Gene3D	-	141	253	IPR038408	-
	Mal1g0636	686	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	9	669	-	-
	Mal1g0636	686	ProSitePatterns	Protein kinases ATP-binding region signature.	379	401	IPR017441	GO:0005524
	Mal1g0636	686	SMART	serkin_6	373	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal1g0636	686	SUPERFAMILY	Protein kinase-like (PK-like)	359	670	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g0636	Mal-Chr1	7413766	7416888	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g0636	38	662	Receptor kinase-like Gene Family	AT4G21410	43.899	2.67e-178	522

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mal1g0636		Pkinase	4.1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g0636	-		-	gmx:100787936	688.337