LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g0630	ATGGCTCTTTTTCCCTTTCTTTGTTATCTTTTTGTCATAGTTGTATCCCATGCAAAAGCCGATGATCCTGTATCCTGTGATAACAACAGAGGCAACTACACAGCCAATAGCACCTACGACAACAACCTTAAAACCCTTTTGTCCAATTTTTCTTCTCATACAGAAATCAACTACGGTTTCTACAATTTCTCATATGGTGAAGATCCAGACAAAGCATATGCCATTGGGGTGTGTCGCGGAGATATTGAGCCAAATCAATGTCGTACAAACCTAAACAATTCCATTGGCTATCTCAGAGAACAATGTCCAAATCAAAAAGAGGCAATTGTGTGGGGTGGTAATTTAACTTTGTGGTACTCAAATCGCTCAATTTTTGGAATCGTGGAAACTTCGCCTACACAATATTTGATTTATGAAAGGAATGCAAGTGATGCAGATCAGTACAAGCAAGCATTGAGTAACTTGATGACAAATCTAAGAGAAAAAGCTGCATCAGGTGACTCTCGTCGTAAGTATGAAGCAGATAATGTGTATGATCCAGCAAATTTGGCAACCATATACGGTTATGTGTTGTGTATGCCTGATTTGTCTTCGCAACAATGCACTGATTGCTTGGTTCAGACTATTTCAGAAATCCCAAATTGTTGTAACGGGAAGATGGGAGGAAATATTCTTAAACCAAGTTGTCGTCTTAGATTTGATCCTTATCGCTTCTACAATCCGACGATTGAATTAGACTCAAATGCAACACCTCCTTCACCGTCACTACCACCTTCTTCAGGAGAAAGAAAAACTCCAACTGTCATCGCCATCGTAGTACCAGTTGTTACCTTGGTTTTGGTGCTCATTTTTATTTGCATCTACATAAGATTGAGAAAGCGAAAGCAATTTTCTAAAGCTAATAATGGAGCATATGATGATGAAGATGAAGGTGAAATTACAATTGTTGAGTCATTGCAATTTAACTTTGATACCATACGAGTTGCTACAAGTGACTTCTCGGATTCTAATAAACTTGGACAAGGTGGATTTGGAGTTGTTTATCGGGGTAAACTCCCTAATGGACAAATGATTGCTGTCAAAAGATTGTTAAAAGATTCCAGCCAAGGAGATGTGGAATTTAAAAATGAAGTACTATTAGTAGCCAAGCTTCAACATCGAAATTTAGTTAGGCTACTTGGTTTCAGTTTAGAAGGGAGTGAAAGACTCCTTATTTATGAATTTGTTACAAATAAAAGTCTTGATTACTTCATATTTGATCCAACCAGGAAAGCACAATTGAATTGGGAAAAGCGCTATGATATTATAAGAGGTATTGCTCGAGGTCTTCTTTATCTTCATGAGGATTCTCGCCTACGAATTATACATCGTGATATCAAAGCAAGCAACATTCTTTTAGACAATGAAATGAATCCTAAGATATCCGATTTTGGATTGGCGAGATTGTTTGTTATAGATCAATCTGAAGGAAATACAAGTAGAATTGTTGGAACTTATGGATATATGGCACCTGAGTATGCAATGAATGGACACTTTTCGGTAAAATCAGATGTCTTTAGTTTTGGAGTATTGGTTCTTGAGATTATAAGTGGTCATAAAAATAGTACAGACATTGGTCATGGAAATGATGTTGAGTATCTATTGAGCTATGCATGGAGAAGCTGGAGAGAGGGGAAAGCAAAAAATATTATAGATCCATCATTAAACAATATTTCAGCAAATGAAATAATGAGATGCATCCATATTGGCTTACTCTGTGTTCAAGAAAATGTAGTTGACAGACCAACCATGGCTACTGTTGCACTCATGCTTAATAGTTATTCTCTCACTCTCTCTATACCATCAAAACCTGCGTTTTTTTATGGAAGTGGAACTAGAAGCCTTCAGGACATGGAGTTATGGGCTGGCAATAGTGATGCAACAGCATCGGGTGAATCTATCAACCAAGCTTCAAATACTGATCCATACCCTCGATAG	1977	0.3743	MALFPFLCYLFVIVVSHAKADDPVSCDNNRGNYTANSTYDNNLKTLLSNFSSHTEINYGFYNFSYGEDPDKAYAIGVCRGDIEPNQCRTNLNNSIGYLREQCPNQKEAIVWGGNLTLWYSNRSIFGIVETSPTQYLIYERNASDADQYKQALSNLMTNLREKAASGDSRRKYEADNVYDPANLATIYGYVLCMPDLSSQQCTDCLVQTISEIPNCCNGKMGGNILKPSCRLRFDPYRFYNPTIELDSNATPPSPSLPPSSGERKTPTVIAIVVPVVTLVLVLIFICIYIRLRKRKQFSKANNGAYDDEDEGEITIVESLQFNFDTIRVATSDFSDSNKLGQGGFGVVYRGKLPNGQMIAVKRLLKDSSQGDVEFKNEVLLVAKLQHRNLVRLLGFSLEGSERLLIYEFVTNKSLDYFIFDPTRKAQLNWEKRYDIIRGIARGLLYLHEDSRLRIIHRDIKASNILLDNEMNPKISDFGLARLFVIDQSEGNTSRIVGTYGYMAPEYAMNGHFSVKSDVFSFGVLVLEIISGHKNSTDIGHGNDVEYLLSYAWRSWREGKAKNIIDPSLNNISANEIMRCIHIGLLCVQENVVDRPTMATVALMLNSYSLTLSIPSKPAFFYGSGTRSLQDMELWAGNSDATASGESINQASNTDPYPR*	659

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g0630	658	Gene3D	Phosphorylase Kinase; domain 1	296	408	-	-
	Mal1g0630	658	ProSiteProfiles	Protein kinase domain profile.	333	658	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal1g0630	658	ProSitePatterns	Protein kinases ATP-binding region signature.	339	361	IPR017441	GO:0005524
	Mal1g0630	658	CDD	STKc_IRAK	339	605	-	-
	Mal1g0630	658	SMART	serkin_6	333	580	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal1g0630	658	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	454	466	IPR008271	GO:0004672\|GO:0006468
	Mal1g0630	658	SUPERFAMILY	Protein kinase-like (PK-like)	318	621	IPR011009	-
	Mal1g0630	658	ProSiteProfiles	Gnk2-homologous domain profile.	21	124	IPR002902	-
	Mal1g0630	658	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	3	647	-	-
	Mal1g0630	658	ProSiteProfiles	Gnk2-homologous domain profile.	130	238	IPR002902	-
	Mal1g0630	658	Gene3D	-	23	123	IPR038408	-
	Mal1g0630	658	Gene3D	-	131	238	IPR038408	-
	Mal1g0630	658	MobiDBLite	consensus disorder prediction	244	263	-	-
	Mal1g0630	658	Pfam	Protein kinase domain	334	538	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal1g0630	658	Gene3D	Transferase(Phosphotransferase) domain 1	409	612	-	-
	Mal1g0630	658	Pfam	Salt stress response/antifungal	26	121	IPR002902	-
	Mal1g0630	658	Pfam	Salt stress response/antifungal	141	234	IPR002902	-
	Mal1g0630	658	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	3	647	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g0630	Mal-Chr1	7340986	7343831	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g0630	3	619	Receptor kinase-like Gene Family	AT4G21410	49.457	0.0	597

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mal1g0630		Pkinase	3.6e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g0630	-		-	mtr:MTR_5g065130	933.324