Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0627 ATGGAAATAGTTTCTTGCAAGTTACTATTTTCCTTTTATTCTTTTCTCTTTTTCATTACTACTTTTGTATCTCAAGCCAAAGCTCAACCAAATTTCCTGTACAACCAAATTTCCTGTATCAACAATAATGGCAACTACACAACCAATAGCACATATCACAACAACCTTAACACTCTTTTGGCCAATCTCACTTCCAACACAGAAATCAATTACGGTTTCTATAATTTCTCTTATGGCCAAAACACTGACAAAGTAAACGCCATTGGACTATGCAGAGGAGATGTTAAACCCAACGTTTGTCGCAGTTGTCTCAACGATTCAAGAGTTCTTCTCACAAAACTCTGTCCAAATAAAAAAGAAGCAATTGGGTGGTATGATCACTGTATGTTGCGTTACTCAAATCGATCAATATTTGGCATTATGGAAGGTTCACCATCGTTTTATATGTCGAACGCAAACAATGAAACAGAGGTGGATCAATTTAATCGAGTTCTTGGGAACTTGATGAGGAAACTGAAAGAAAAAGCTGCATCAAGTGATTCTCGTCGTAAATTTGCTACGGATAATGCAACTGATGTGAATTTGAATTTTCAAACCATATATGGTCTTGTGCAGTGTACACCTGATTTGTCATTGCAAGATTGCAATCATTGTTTAGATGATGCTATCTCAGAAATTCCACGTTGTTGTAATAACAAGATAGGTGGTAGAGTTATTAAACCAAGTTGTAATATTAGATATGAAACCTATCGCTTTTATGATCCTACGCCCATAATAGACCCAGATGAAACCTCCCCATCAGAAGAAGAAAAAAGCAAATCATCACATATTACCATCGCCATAGTTTTACCTATTGTTGTTGTTGTTGTTGCTGCCCTGCTAATTTTCATTTGCATATGCTTAAGGAGAAGTAAGGCAAGGATAAATCTCGAAGAAATACAAGAAGATGATAATGATGATATTGAAATCGCTGAGTCATTGCAATTCAACTTTGAGACATTACGAGTTGCTACAAGTGACTTTTCTGAAGCTAATAAACTTGGACATGGTGGATTTGGAGTTGTTTATCAGGGTAGACTCTCCGATGGACAAGTAATTGCAGTCAAAAGGTTGTCAATAAATTCAGGACAAGGGGATATTGAATTTAAGAATGAAGTGCTTTTACTCGCTAAGCTTCAACATCGAAATTTAGTTAGACTGCTTGGTTTTTGTCTAGAAGGAAGAGAAATGTTGCTTGTCTATCAATTTGTTCCTAATAAAAGTCTTGACTATTTTATATTTGATCCAATAAAGAAAGCACAATTGGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTAGAGGCCTTCTTTATCTTCATGAGGATTCTCAACTTCGTATTATACATCGTGATCTTAAAGCAAGTAACATTCTCTTGGACGAAAAGTTGACTCCTAAAATATCAGATTTTGGTATTGCCAGACTACTTCTCGTTGATCAAACTCAAGTAAATACAAATAAAATCGTTGGAACATATGGATATATGGCTCCTGAGTATGTAATGTTCGGACAATTTTCAGTAAAATCAGATGTTTTTAGTTTTGGTGTACTTGTTTTGGAGATTATAAGTGGCCAAAAAGCTTGTCATGTTGTTCAGGGGGAGAGTCAGGAGGATTTACTTACCTTTGCGTGGAGAAACTGGAAGGAGGGTACAATCACAAATATAATAGATCCATCATTAAACAATGGTTCACAAAATGAAATGATGAGATGCATTCACATTGGTTTACTCTGTGTTCAAGAAAATTTGGTTGAAAGACCAACTATGGCAACGGTTGCATTCATGCTTAGTAGTAATTCCATCACTCTCTCAGTACCTTTGGAGCCTGCATCTTTTTTGGACGGCAGAACTAGAAGCCTTCCAGTTCGAGACGTGCAATTTGGGAAAGATAACTCGATAAACCGTGTTTCAATTACTGACCCATACCCTCGATAG 1980 0.3646 MEIVSCKLLFSFYSFLFFITTFVSQAKAQPNFLYNQISCINNNGNYTTNSTYHNNLNTLLANLTSNTEINYGFYNFSYGQNTDKVNAIGLCRGDVKPNVCRSCLNDSRVLLTKLCPNKKEAIGWYDHCMLRYSNRSIFGIMEGSPSFYMSNANNETEVDQFNRVLGNLMRKLKEKAASSDSRRKFATDNATDVNLNFQTIYGLVQCTPDLSLQDCNHCLDDAISEIPRCCNNKIGGRVIKPSCNIRYETYRFYDPTPIIDPDETSPSEEEKSKSSHITIAIVLPIVVVVVAALLIFICICLRRSKARINLEEIQEDDNDDIEIAESLQFNFETLRVATSDFSEANKLGHGGFGVVYQGRLSDGQVIAVKRLSINSGQGDIEFKNEVLLLAKLQHRNLVRLLGFCLEGREMLLVYQFVPNKSLDYFIFDPIKKAQLDWERRYKIIGGIARGLLYLHEDSQLRIIHRDLKASNILLDEKLTPKISDFGIARLLLVDQTQVNTNKIVGTYGYMAPEYVMFGQFSVKSDVFSFGVLVLEIISGQKACHVVQGESQEDLLTFAWRNWKEGTITNIIDPSLNNGSQNEMMRCIHIGLLCVQENLVERPTMATVAFMLSSNSITLSVPLEPASFLDGRTRSLPVRDVQFGKDNSINRVSITDPYPR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0627 659 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Mal1g0627 659 ProSiteProfiles Protein kinase domain profile. 341 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0627 659 Gene3D - 145 252 IPR038408 -
Mal1g0627 659 Gene3D - 34 136 IPR038408 -
Mal1g0627 659 ProSiteProfiles Gnk2-homologous domain profile. 143 252 IPR002902 -
Mal1g0627 659 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Mal1g0627 659 Pfam Salt stress response/antifungal 153 250 IPR002902 -
Mal1g0627 659 SMART serkin_6 341 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0627 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mal1g0627 659 Gene3D Phosphorylase Kinase; domain 1 303 416 - -
Mal1g0627 659 Gene3D Transferase(Phosphotransferase) domain 1 417 619 - -
Mal1g0627 659 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 646 - -
Mal1g0627 659 SUPERFAMILY Protein kinase-like (PK-like) 324 611 IPR011009 -
Mal1g0627 659 Pfam Protein tyrosine and serine/threonine kinase 344 607 IPR001245 GO:0004672|GO:0006468
Mal1g0627 659 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Mal1g0627 659 CDD STKc_IRAK 347 611 - -
Mal1g0627 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0627 Mal-Chr1 7231708 7234544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0627 7 659 Receptor kinase-like Gene Family AT4G21410 48.387 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal1g0627 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0627 - - gmx:100791056 836.254