Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0620 ATGGACGCTTCGACTTCCGTAGTAAGTGGCTCACAACCCGTATCGCCGTTGAACAATCCCGAAACAGCCGCGACTGAGGTATTTTTCTTTGTTAACTTTGCACATGGTATGGGAAATGTTTGCTTGTCCGATGAAAACATGAGTGATGCTTCTGAGGACGAGTTAGAATACAATGATAATGTTGAATTTTCTGGTTTAGAATTCACTGATGAAACAACTGTTAATGGTTTGGAGGACATCTGGAAAATCAACTTCACAAATTTAAGAGTGGAAGATGTAATTAAGTACCACTTTTCAGACGTTGGGGTGGCATACTTATTTTATAATTGGTATGCTGGTTTGCATGGTTTTGCTGCAAGGAAGAGCAAGATAATGAGGAACAAAAATGGGGAAAAAACACAACAAATGTTCTTGTGTTATAGACAGGGACACCGAGAAGAAAAAGTTGGAAGCACAAGTCGAAAAAGAGAACCAAAGCCACTCACAAGATGCGGCTGTGATGCAAAATGTAGGGTTCACATTGATGTTAATAGTGGCCGGTGGTACGTTAAGTATCTAAATGATGTCCACAACCATACTTTGTTGGATAGTAAGTTCATGGGCATGCTACCGGCACATAGAAAAATGAATGACTACGACAAATTTCAAATGAACAGCATGAGGAAGGTTGGAATTAGGACTTCAAATATTTATGGTTGGTTTGCTTCTCAGGCTGGAGGATTTGAGAAAGTTGGTTTTAATAAACGTGACATGTATAATGAGCAAGGGAGACAAAAACAAACTGAATACACAGATGCAAATGCTGCTTTGGATTTTCTAAACAACATGGGTAAGAGTGATGAAAAGTTGTTTTTTAGACATGTTGTTAATGAAGATGGAAGTTTGTTACATCTGTTTTGGTGTGATGGGGTTGCGCAGAATGATTATTCAGTGTTTGGTGATGTGCTTGCATTCGATGCGACTTATGGAAAAAATAGATACAAGTGTCCCGTTGTTATTTTTTCTGGGGTAAACCACCACAATCAAACTATTGTGTTTGCTAGTGCCATTGTTGGAAATGAAAAGGAAGAAACGTATGTTTGGTTACTTGAAAACTTGGTTGAAGCAATGGGAGGTAAAACTCCAAAGTTAGTTATTACAGATGGAGACAAGTCTATGAGGAATGCAATCAAAAGGGTCCTTCCTAATTCCCATCATCGGTTATGCGCTTGGCACTTGCTACGCAACGCAACAAGTAACGTAGGCAATACCGCGTTTGTGCCTAAGCTAAGACAGTGCATGTTGGGTGATTATGAAGTTCATGAGTTTCAACGGAAGTGGGATAAAATGGTTGCGGAGTTTGGATTGGAAGAGAATACATGGGTTGCAGAAATGTTCGAGAAGCGAAGTATGTGGGCCACAGCCCACATACGAGGTAACTTCTTTGCTGGTTTCAGAACGACGTCTCGATGTGAGGGGCTGCACTCGTTTCTGGGAAAATATGTTAACTATGAAAACAACCTGTTGGAGTTCTTACAACATTTTTTCCGTGCTCTTAGTTATATGAGGTTCAGAGAAGTGCAAGCTGACTTTCAGTCATCACATGGACAAGTTGTGTTGCAAACACAATTGCAAGCTCTTGAGAAGTCTGCGGCAGCTGTATACACCAAGGAGGTATTTTTGCTTTTCCGACCTTTTCTTGAAAGATCATGCACATGTAGGGTCGTAAATTGCAAGCAAACAACATCATTGTATAAATATAAAGTGTCCAAGTATTGCAGAAATGGTCTGGAGTGGACTGTAACATTTTGCCCATTGAGTCCGGATTTTAAGTGTTCTTGTCAGCGGTTTGAATCATTAGGTATTCCTTGTGAACATGTGGTGTGTGTTTTGGTAAATATGGACATTGTGCGAATTCCAGAATGTTTGGTGCTGAAAAGGTGGACAAAGACAGCTAAGGACTCGCTTGTTTTCAATGGCAACATGTCTGCAACACAAGATCCATCATTGATTAGTCAATATGTGGGTATGGTGGAGAAGTGTAAGAAGATGGCATTGGCGGCTGTGTCTTGTGGCAGACCACAGTATGTGCATAGTACAATGGATTGGGTGACTTCACGTACACAAATGTTGGAAGCACTGGCTAAAGGTGTTGGAGGACCACAACAAGATTCAACACCGCAACATGATGATATTCTTGAAGGCTCACTAAGGAACCCAACCAGGGTGAGGACAAAGGGCTGTGGTGCCTCGTCCTCGTCAGTGCAAAGCAACGGTAAACAAACTGCAAGAAGGGTACAGACATGTGGAATATGCAGGTTAGAGGGTCACAACCGAAAATCGTGTCGCTTTACGAGTCATGTAGAGTATATGGCTCAAACTCAAGTTGGTTCAAATATTATATTTGAGGGAGAAGAAGACGAAGATGAAGTTGATGATTTTGGTGATGTCCATCCACATACGGTAAATAACTTATAA 2457 0.4094 MDASTSVVSGSQPVSPLNNPETAATEVFFFVNFAHGMGNVCLSDENMSDASEDELEYNDNVEFSGLEFTDETTVNGLEDIWKINFTNLRVEDVIKYHFSDVGVAYLFYNWYAGLHGFAARKSKIMRNKNGEKTQQMFLCYRQGHREEKVGSTSRKREPKPLTRCGCDAKCRVHIDVNSGRWYVKYLNDVHNHTLLDSKFMGMLPAHRKMNDYDKFQMNSMRKVGIRTSNIYGWFASQAGGFEKVGFNKRDMYNEQGRQKQTEYTDANAALDFLNNMGKSDEKLFFRHVVNEDGSLLHLFWCDGVAQNDYSVFGDVLAFDATYGKNRYKCPVVIFSGVNHHNQTIVFASAIVGNEKEETYVWLLENLVEAMGGKTPKLVITDGDKSMRNAIKRVLPNSHHRLCAWHLLRNATSNVGNTAFVPKLRQCMLGDYEVHEFQRKWDKMVAEFGLEENTWVAEMFEKRSMWATAHIRGNFFAGFRTTSRCEGLHSFLGKYVNYENNLLEFLQHFFRALSYMRFREVQADFQSSHGQVVLQTQLQALEKSAAAVYTKEVFLLFRPFLERSCTCRVVNCKQTTSLYKYKVSKYCRNGLEWTVTFCPLSPDFKCSCQRFESLGIPCEHVVCVLVNMDIVRIPECLVLKRWTKTAKDSLVFNGNMSATQDPSLISQYVGMVEKCKKMALAAVSCGRPQYVHSTMDWVTSRTQMLEALAKGVGGPQQDSTPQHDDILEGSLRNPTRVRTKGCGASSSSVQSNGKQTARRVQTCGICRLEGHNRKSCRFTSHVEYMAQTQVGSNIIFEGEEDEDEVDDFGDVHPHTVNNL* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0620 818 Pfam FAR1 DNA-binding domain 107 195 IPR004330 -
Mal1g0620 818 PANTHER OS02G0262500 PROTEIN 92 674 - -
Mal1g0620 818 Pfam SWIM zinc finger 605 623 IPR007527 GO:0008270
Mal1g0620 818 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 92 674 IPR031052 GO:0006355
Mal1g0620 818 ProSiteProfiles Zinc finger SWIM-type profile. 580 628 IPR007527 GO:0008270
Mal1g0620 818 Pfam MULE transposase domain 315 409 IPR018289 -
Mal1g0620 818 SMART 26again6 603 630 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0620 Mal-Chr1 7139825 7142348 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g0620 MULE 3.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0620 - - ccaj:109791994 668.692