Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0615 ATGAGTTCAAGTAAGTACGTGTCTTCTGGAAAAGTTGTCACGATGGAAGTAGCACTAGCATATCTCAAGGCACTAAAAGTTGAGTTTCAAGATGAGAGGAAAAAGTATTATGAATTTACAAAAGTTATGAGGAAATTCAAAGCTGGGAGAATTGATACAAAAGGTGTCATAGCAAGAGTGAAGAAGTTGCTTAAAGGGCATACAAATTTAATTTTGGGTTTCAACTACTTCTTGCCAAAAGGATATGAAATCAGTACTAATGATAAGAGCGAAAAGTATGATGAATATTTGAAAGTTATGAGGGATTTCAAGGCTCTAAGAATTGACAATGAAATAGAGTTGCTTGTTCAATTTTTTTCACGTCTATAA 369 0.3333 MSSSKYVSSGKVVTMEVALAYLKALKVEFQDERKKYYEFTKVMRKFKAGRIDTKGVIARVKKLLKGHTNLILGFNYFLPKGYEISTNDKSEKYDEYLKVMRDFKALRIDNEIELLVQFFSRL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0615 122 Pfam Paired amphipathic helix repeat 35 78 IPR003822 GO:0006355
Mal1g0615 122 PANTHER SIN3B-RELATED 12 88 IPR039774 GO:0003714
Mal1g0615 122 ProSiteProfiles PAH domain profile. 11 81 IPR003822 GO:0006355
Mal1g0615 122 Gene3D Paired amphipathic helix 18 79 IPR036600 GO:0006355
Mal1g0615 122 SUPERFAMILY PAH2 domain 14 82 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0615 Mal-Chr1 7082697 7083186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0615 13 85 WRKY Transcription Factor Family AT4G12020 50.685 1.14e-15 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0615 PAH 1.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0615 K11644 - mtr:MTR_1g105960 154.066