Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0614 ATGGAAGAAGCACTAGCATATATCGAAGCAGTAAAAGATGAGTTTCAAGATGAGATAGAAAAGTATGACGAATTTTTAAATGTTATGATGGATTTCAAGGCTCTGAGAATTGATACAAGTGGTGTCATAGCAAGATTGAAGGATTTGTTTAAAGGACATACAAATTTAATTTTAGGATTCAACATCTTCGTGCCAAAAGGGTATGAGTTGGATTTTGGCATAGATCTCATTGGAGTGTTGGACGAAGCAAAAGCATATGTCAATGCAGTAAAAGTTGAGTTTCAATATGAGAGGGAAAAGTATGATGAATTTTTGAAAGCTATTAGGGATTGCAAGGCTCAAAGACTTGATATAAAAGGTCTCGCGACAAGAGTGAATGAACTATTTAAAGGGCATGCAAATTTAATTTTGGGATTTAACAAATTCTTGCTAAAGAAATATCAAATTAGTACTGATGATGATGATGATGATGAGACTGACGAAGAAGCAGAAGACATTGAAATGGAACAGAACGACGAGGAAGTACTTGACAATGAAATAGAGTTGAATGTGCAACTTCTTTAA 564 0.3422 MEEALAYIEAVKDEFQDEIEKYDEFLNVMMDFKALRIDTSGVIARLKDLFKGHTNLILGFNIFVPKGYELDFGIDLIGVLDEAKAYVNAVKVEFQYEREKYDEFLKAIRDCKAQRLDIKGLATRVNELFKGHANLILGFNKFLLKKYQISTDDDDDDETDEEAEDIEMEQNDEEVLDNEIELNVQLL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0614 187 MobiDBLite consensus disorder prediction 151 171 - -
Mal1g0614 187 SUPERFAMILY PAH2 domain 2 66 IPR036600 GO:0006355
Mal1g0614 187 MobiDBLite consensus disorder prediction 153 171 - -
Mal1g0614 187 ProSiteProfiles PAH domain profile. 1 67 IPR003822 GO:0006355
Mal1g0614 187 SUPERFAMILY PAH2 domain 80 143 IPR036600 GO:0006355
Mal1g0614 187 ProSiteProfiles PAH domain profile. 70 146 IPR003822 GO:0006355
Mal1g0614 187 Gene3D Paired amphipathic helix 82 143 IPR036600 GO:0006355
Mal1g0614 187 Gene3D Paired amphipathic helix 3 65 IPR036600 GO:0006355
Mal1g0614 187 PANTHER SIN3B-RELATED 1 119 IPR039774 GO:0003714
Mal1g0614 187 PANTHER SIN3B-RELATED 80 163 IPR039774 GO:0003714
Mal1g0614 187 PANTHER PROTEIN, PUTATIVE-RELATED 1 119 - -
Mal1g0614 187 PANTHER PROTEIN, PUTATIVE-RELATED 80 163 - -
Mal1g0614 187 Pfam Paired amphipathic helix repeat 20 63 IPR003822 GO:0006355
Mal1g0614 187 Pfam Paired amphipathic helix repeat 99 143 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0614 Mal-Chr1 7075646 7076209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0614 3 77 WRKY Transcription Factor Family AT4G12020 55.556 2.11e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0614 PAH 3.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0614 K11644 - mtr:MTR_1g105955 248.44