Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0613 ATGGAAGAAGCAATATCATATGTAATGGCAATAAAAGTTGAGTTTCAAGATGAGAGGGAAAAATATAATGAGTTCTTAAAAGTCCTAAAAGATTTTAAGGCTCTAAGAATTGATACAAGTGGTGTCGTGTCAAGATTGAAGGAGTTGTTTAAAGGACATACAAATTTAATTTTGGGTATCAACACGTTCCTGCCAAAAGGATATGAGATGAGTACTAATGAAGAAGCAGAAGACGTGGAAGTGGAACATGAAGACGAGGAAGTACTTGACAATAAAATAGAGTTGTTTGTTCAACTTCTTTCACGTCTATAA 312 0.3397 MEEAISYVMAIKVEFQDEREKYNEFLKVLKDFKALRIDTSGVVSRLKELFKGHTNLILGINTFLPKGYEMSTNEEAEDVEVEHEDEEVLDNKIELFVQLLSRL* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0613 103 SUPERFAMILY PAH2 domain 2 66 IPR036600 GO:0006355
Mal1g0613 103 Gene3D Paired amphipathic helix 3 65 IPR036600 GO:0006355
Mal1g0613 103 PANTHER SIN3B-RELATED 1 83 IPR039774 GO:0003714
Mal1g0613 103 Pfam Paired amphipathic helix repeat 20 64 IPR003822 GO:0006355
Mal1g0613 103 ProSiteProfiles PAH domain profile. 1 67 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0613 Mal-Chr1 7054154 7054465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0613 3 86 WRKY Transcription Factor Family AT4G12020 46.429 5.56e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0613 PAH 1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0613 K11644 - mtr:MTR_1g105960 117.472