Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0612 ATGTCTTTTGGAGAAGTTCCCACGAATGAAGAAGCACTAGCATATATCAAGGCAGTAAAAGATGAGTTTAAGGATGAGATACAAAAGTATGATGAATTTTTAAAAGTTCTTATGGATTTGAAGGCTCTGAAAATTGATATAAGTGGTGTCATAATAAGATTGAAGGAGATGTTTAAAGGGCATACAAATTTAATTTTGGGATTCAACATCTTCCTTCCAAAAGGATATGAGTTGGATTATGGCATAGACCCAATTGGAGTGTTGGAAGAAGCAAAAGTATATGCCAATGCAGTAAAAGTTGATTTTCAAGATGAGAGGGAAAAGTATGATGAATTTTTGAAAGTTATTAGGGATTGCAAGGCTGAGAGAATTGATACAAGAGGTCTCATAACAAAAGTTAAGGAGCTGTTTAAAGGACATACAAATTTAATTTCGGGATTCAACACTTTCTTGCCAAAGAAATATCAAATCATTACTGATGATGATGATGACGACGACGACATTAACGAATATGAGACTGATAAAGAAGCAGAAGACATGGAAGTCGAATGGAACGACGAGGAAGTGCTTGACAATGAAATTGAGTTGATTTCTCAACATCTTTAA 606 0.3432 MSFGEVPTNEEALAYIKAVKDEFKDEIQKYDEFLKVLMDLKALKIDISGVIIRLKEMFKGHTNLILGFNIFLPKGYELDYGIDPIGVLEEAKVYANAVKVDFQDEREKYDEFLKVIRDCKAERIDTRGLITKVKELFKGHTNLISGFNTFLPKKYQIITDDDDDDDDINEYETDKEAEDMEVEWNDEEVLDNEIELISQHL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0612 201 ProSiteProfiles PAH domain profile. 6 75 IPR003822 GO:0006355
Mal1g0612 201 PANTHER PROTEIN, PUTATIVE-RELATED 9 127 - -
Mal1g0612 201 Gene3D Paired amphipathic helix 90 152 IPR036600 GO:0006355
Mal1g0612 201 Gene3D Paired amphipathic helix 11 73 IPR036600 GO:0006355
Mal1g0612 201 PANTHER PROTEIN, PUTATIVE-RELATED 88 172 - -
Mal1g0612 201 Pfam Paired amphipathic helix repeat 28 72 IPR003822 GO:0006355
Mal1g0612 201 Pfam Paired amphipathic helix repeat 107 151 IPR003822 GO:0006355
Mal1g0612 201 PANTHER SIN3B-RELATED 88 172 IPR039774 GO:0003714
Mal1g0612 201 SUPERFAMILY PAH2 domain 89 155 IPR036600 GO:0006355
Mal1g0612 201 PANTHER SIN3B-RELATED 9 127 IPR039774 GO:0003714
Mal1g0612 201 ProSiteProfiles PAH domain profile. 83 154 IPR003822 GO:0006355
Mal1g0612 201 SUPERFAMILY PAH2 domain 7 74 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0612 Mal-Chr1 7049200 7049805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0612 8 89 WRKY Transcription Factor Family AT4G12020 50.000 3.00e-19 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0612 PAH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0612 K11644 - mtr:MTR_1g105955 244.588