Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0599 ATGATGAAGATGCTCCGAAACGACGATGATGCATTGGAGTATATTAAGGAAGTCGAAGTTGCATTTCAACATAACACGAAAAAGTATAATGAGTTTTTAAAATTCATTAAGTATTTCCAGGTTGGAATAACTCGTATAAGTCCTGAAAAGTATGATGAGTATTTTAACATTAGCAAAGCAAGAGTGAAGAAGCTGCTTAAAGAGCATACAAATTTAATTTTGGGATTCAACACCTTTCTGCCAAAGCAACATCATATCATGCTTCCATTTCAAAAGACCAATGAAATAAAGATGAAGATGCTCCGAAACGACAATGATGCATTGGCGTATATTAAGGAAGTCAAAGTTGCATTTCAACATAACACGAAAAAGTATAATGAGTTTTTAAAATTCATTAAGTATTTCCAGGTTGGAATAACTCGTATAAGTCCTGAAAAGTATGATGAGTATTTTAACCTTGGCAAAGCAAGAGTGAAAACGCTGCTTAAAGAGCATACAAGTTTAATTTTGGGATTCAACACCTTTCTGCCAAAGCAACATCATATCACGCTTACATTTCAAGAGACCAATGGAAAACAGATGAAGATGATAAAAGAGAACTGTGAACTTCCTTGGGATGTGCTTGATATCATTTCCAAAACACTAGATTTTGATGACCACTTTCAGTTTGCCGGTGTATGCAAGAATTGGAGAGCTTCTCATAAAATATACTGGAGAAATTTCTTGGCATCCCAGGAACCATTACTTCTTCAAATTTCGTGTTATCGTCAGGGATCATTTTCCTTTATTAGCATACCCGATCTTAAAGTTTATTGCTCAAAGATGGGGAAGTACTTCTCCTGCTCTGCCTATGTTACCATTTCTAGCGGATATTTTATCATGGCGGGGTACAATAATAATCTATTTATGCTAATAAATCCATTTACAAGAACAAAAAAGGTAGTCAATATCCCTACCGACTATTCTTGTTTAAATACACGTGCCTTACTTGCTTTTGGCAAATGCTCTGAGGAATTTGTCTTGGTCGTTTTATGCCGTCGGGGTTTGCATGTCTATCAATCTCGAAATTGTGGTTGGGTTGCTTATTCGACAATGGAAGATCAAGGGAGCATTGTTGACTTTGTGGTTTTTCATAATATAATATATGTTGTTACTGACAAGGCCAACATAGGGGTACTCAGCTTGAATTCTGCAAATATTAAATTTCTAAAACTGAAGAGTATTCCCGATGTATTTTGCTTTCACCCTAGGTTGGTTAATTGTGATGGACAACTTTTAGTGGTTGATGCAATCTCCAAGAAAATAAGAGATGTCTACACGATAGACTTCTCAACAATGAATTATGTTAAGCTGGAAACTTTGGGCGACATTGCATTATTTTATGCTTCAAAGAGAAATTGTTATGCATTGAGCAGCCCCAACAGGTGGGGATATAAGAGCAACTGTGTGTATGTCGTCAATTCTCCATCTACAAAATGTAGCGTGTATTCAGTTGATGATAAAAAATTGCTAAAACACGTTACCCTTCCAACTCCTCATGGAGCAAGTTTCTTAAGTTTCTTAAGGTCTGATTGGTGTTTTAGACATCTACAATATGAGGTGGATTATTCTTTAGTCGAGTAA 1623 0.3586 MMKMLRNDDDALEYIKEVEVAFQHNTKKYNEFLKFIKYFQVGITRISPEKYDEYFNISKARVKKLLKEHTNLILGFNTFLPKQHHIMLPFQKTNEIKMKMLRNDNDALAYIKEVKVAFQHNTKKYNEFLKFIKYFQVGITRISPEKYDEYFNLGKARVKTLLKEHTSLILGFNTFLPKQHHITLTFQETNGKQMKMIKENCELPWDVLDIISKTLDFDDHFQFAGVCKNWRASHKIYWRNFLASQEPLLLQISCYRQGSFSFISIPDLKVYCSKMGKYFSCSAYVTISSGYFIMAGYNNNLFMLINPFTRTKKVVNIPTDYSCLNTRALLAFGKCSEEFVLVVLCRRGLHVYQSRNCGWVAYSTMEDQGSIVDFVVFHNIIYVVTDKANIGVLSLNSANIKFLKLKSIPDVFCFHPRLVNCDGQLLVVDAISKKIRDVYTIDFSTMNYVKLETLGDIALFYASKRNCYALSSPNRWGYKSNCVYVVNSPSTKCSVYSVDDKKLLKHVTLPTPHGASFLSFLRSDWCFRHLQYEVDYSLVE* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0599 540 ProSiteProfiles PAH domain profile. 99 179 IPR003822 GO:0006355
Mal1g0599 540 PANTHER OS06G0113600 PROTEIN 193 535 - -
Mal1g0599 540 ProSiteProfiles PAH domain profile. 3 83 IPR003822 GO:0006355
Mal1g0599 540 PANTHER OS06G0113600 PROTEIN 193 535 - -
Mal1g0599 540 SUPERFAMILY PAH2 domain 9 82 IPR036600 GO:0006355
Mal1g0599 540 Pfam F-box domain 202 231 IPR001810 GO:0005515
Mal1g0599 540 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 262 516 IPR011044 -
Mal1g0599 540 SUPERFAMILY PAH2 domain 105 179 IPR036600 GO:0006355
Mal1g0599 540 Pfam Paired amphipathic helix repeat 124 176 IPR003822 GO:0006355
Mal1g0599 540 Pfam Paired amphipathic helix repeat 28 80 IPR003822 GO:0006355
Mal1g0599 540 Gene3D Paired amphipathic helix 102 180 IPR036600 GO:0006355
Mal1g0599 540 Gene3D Paired amphipathic helix 7 84 IPR036600 GO:0006355
Mal1g0599 540 SUPERFAMILY F-box domain 202 246 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0599 Mal-Chr1 6919364 6927130 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g0599 PAH 3.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0599 - K11644 cam:101488742 521.161