Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0579 ATGGAACCTGCCCAATTGATTTCTGAAGAATGGGATTCTCTTAGTGGACAGTACACAGCTGAGGAAGCTAACTTCATGACTCAGTTTCTTGGTGGTAATGGAACCTATTCATGTGATTTGGCAACAAACATTGATTCACTGTCCATGTTTTTTTGTTTGGGAGATACCAAATTTAGTCCTCAATATTTGGATGATAACTTAGGCAAATACATAAATTATGATTGCATTGATCATGAAGGGTCATGTTTAGAGCCAATGAAACTGGTTCTTGCTGCTGACAACAATTTGCATGATGAAAGAAAGCATGAAATGATCATGGTTTCTGAACCTTCTTCAGAAGAGGATAGAAGCAAAAACATGGAAAACCCTGCAAAAAGATTTAGGAGCTCAATAGAGAGGAGAAGAGAAAGAATAAATGAAAGGTTGAGAATCTTGCAAACTCTTGTCCCAAATGGAACTAAGGTGGATATCAGCACTATGCTAGAGGAAGCTGTCCAATATGTAAAGTTTATGCAGCTTCAAATTAAGCTTCTAAGCTCTGAAGATATGTGGATGTATGCTCCAATTGCTTACAATGGAATAAACATTGGATTAGACCTCAGCTTTTCTTCTCCAACTAATTAA 624 0.3702 MEPAQLISEEWDSLSGQYTAEEANFMTQFLGGNGTYSCDLATNIDSLSMFFCLGDTKFSPQYLDDNLGKYINYDCIDHEGSCLEPMKLVLAADNNLHDERKHEMIMVSEPSSEEDRSKNMENPAKRFRSSIERRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFMQLQIKLLSSEDMWMYAPIAYNGINIGLDLSFSSPTN* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0579 207 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 133 204 - -
Mal1g0579 207 Coils Coil 128 148 - -
Mal1g0579 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 125 189 IPR036638 GO:0046983
Mal1g0579 207 Pfam Helix-loop-helix DNA-binding domain 133 172 IPR011598 GO:0046983
Mal1g0579 207 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
Mal1g0579 207 SMART finulus 129 177 IPR011598 GO:0046983
Mal1g0579 207 MobiDBLite consensus disorder prediction 107 128 - -
Mal1g0579 207 Gene3D - 122 189 IPR036638 GO:0046983
Mal1g0579 207 PANTHER TRANSCRIPTION FACTOR BHLH84-LIKE 133 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0579 Mal-Chr1 6691909 6693292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0579 131 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 81.579 8.78e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g0579 HLH 2.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0579 - - aprc:113871866 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0579 1 6691909 6693292 Mal1g0579 1 6691909 6693292 ECH