Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0568 ATGGTTAGGGATAAGGTTCATATTAATATTGTGTTTATTGGTCATGTTGACTCTGGGAAGTCAACCACTGCTGGTCATTTGATCTACAAGCTTGGAGGTATTAAAAAAGATGTCATTGAGAAACTTGAGAAAGAAGCTGCTGAGGTAAACAGGCATTCATTCAAGTATGCTTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAAAGAGGTATCACGATTGACATTTCTCTGTCCAAGTTTGAGACTACCAAGTACTACTGCACTCTCATTGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATAACCGGGACGTCCAATGCTGACTGTGCTGTTCTCATCATTGATTCAACAACTGATGGTTTTAAAGCTGGTTATTGTGCGGATGGTCAGACCTATCAACATTCTCTTCTTGCCTTTATTCTCGGTGTGGAGCAAATGATCTGCTGCTGCAACAAGATGGATGCCACTACACCCGCATACTCCAGGGATAGGTATGAAGAACTTGTGAAGGTACTTTCAGCCTTTTTGGAGAGGGTTGGCTATAACCCACACAAAGTTCAATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACATCATTGAGAGCTCTACTAACCTTGACTGGTACAAGGGTCCCACCCTTCTTGAAGCTGTTGATCAAATCAAGGAGCCTAAGAGGCCATTAGACAAGCCTCTCCGATTACCACTTAAGGATGTCTACAAGATTGGAGGAATCGGAACTGTGCCTGTGGGACGTGTTGAGACTGGTGTCTTGAAACCTGGAATGGAGGTGACTTTTGCCCCAACTGGGCTGAAAACTGTAGTGAATTCTGTGGAGATGCACCATGAAAAGATCAGTGAGGCCCTACCTGGTGACACTGTGGGATTTAATGTTAAGCATGATGGGTCTGTTAAGGATCTCAGGCGAGGCTATGTTGCCTCAGAGTCCATGCATGACCCAGCTACGGAGGCTGCTAGATTTACATCCCGTGTTGTCATCTTGGATCAGCCTGGCCTGATTCGAAATGGATATACACCTATTCTTGACTGCCACACCTCCCACATTGCTGTCAAGTTTGATAAGCTTGTTACCAAGTTTGACAAGTATTCTGGTACGATAATTGAGAACGATCCCAAATTCTTGGAGGGTGGTGATGCTGCTGTTATTACGATGATCCCCACCAAGCCCATGGTGGTAGAGGCTTTTTCAAAATATCCTCCACTTGGCCGTTTTGCTGCCAGAGACATGCATCGAACTGTGGCTCTTGGAGTCATCGTTGATGTGGAGAAGAAGAATCCTCGTGCTGGAGATAAGATCAATAAGTCGTTGGAGAAGAATCATCCGCGTGCTGGAGAAGAATCATACGTGTCAAACTGTGGCTGTCTGCATCATCCGCATCAAACTGTGGCTGTCGGCCGGCATTGA 1431 0.4577 MVRDKVHINIVFIGHVDSGKSTTAGHLIYKLGGIKKDVIEKLEKEAAEVNRHSFKYAWVLDKLKAERERGITIDISLSKFETTKYYCTLIDAPGHRDFIKNMITGTSNADCAVLIIDSTTDGFKAGYCADGQTYQHSLLAFILGVEQMICCCNKMDATTPAYSRDRYEELVKVLSAFLERVGYNPHKVQFVPISGFEGDNIIESSTNLDWYKGPTLLEAVDQIKEPKRPLDKPLRLPLKDVYKIGGIGTVPVGRVETGVLKPGMEVTFAPTGLKTVVNSVEMHHEKISEALPGDTVGFNVKHDGSVKDLRRGYVASESMHDPATEAARFTSRVVILDQPGLIRNGYTPILDCHTSHIAVKFDKLVTKFDKYSGTIIENDPKFLEGGDAAVITMIPTKPMVVEAFSKYPPLGRFAARDMHRTVALGVIVDVEKKNPRAGDKINKSLEKNHPRAGEESYVSNCGCLHHPHQTVAVGRH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0568 476 Pfam Elongation factor Tu C-terminal domain 323 430 IPR004160 -
Mal1g0568 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 249 IPR027417 -
Mal1g0568 476 Pfam Elongation factor Tu GTP binding domain 6 222 IPR000795 GO:0003924|GO:0005525
Mal1g0568 476 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 230 IPR000795 GO:0003924|GO:0005525
Mal1g0568 476 PANTHER ELONGATION FACTOR 1-ALPHA 1 444 - -
Mal1g0568 476 Gene3D Translation factors 324 431 - -
Mal1g0568 476 CDD EF1_alpha_III 324 427 - -
Mal1g0568 476 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 327 430 IPR009001 -
Mal1g0568 476 Pfam Elongation factor Tu domain 2 248 314 IPR004161 GO:0005525
Mal1g0568 476 PANTHER TRANSLATION FACTOR 1 444 - -
Mal1g0568 476 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Mal1g0568 476 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mal1g0568 476 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mal1g0568 476 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mal1g0568 476 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mal1g0568 476 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mal1g0568 476 Gene3D Translation factors 229 317 - -
Mal1g0568 476 CDD EF1_alpha 9 227 - -
Mal1g0568 476 SUPERFAMILY Translation proteins 226 318 IPR009000 -
Mal1g0568 476 TIGRFAM EF-1_alpha: translation elongation factor EF-1, subunit alpha 1 434 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mal1g0568 476 CDD EF1_alpha_II 231 318 - -
Mal1g0568 476 Gene3D - 1 226 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0568 Mal-Chr1 6489786 6491295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0568 1 435 Eukaryotic Initiation Factors Gene Family AT5G60390 75.632 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0568 K03231 - gmx:100801611 679.478